Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq9846 73.4 1e-10 seq5192 73.4 1e-10 >seq9846 Length=1191 Score = 73.4 bits (80), Expect = 1e-10 Identities = 78/100 (78%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 273 GTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACT 332 |||||| | |||||| |||| | | | | | ||||||||| ||||||||||||||||| Sbjct 350 GTTTCACGTACTATTTAACTCTC-TATTCAGAGTTCTTTTCAACTTTCCCTCACGGTACT 408 Query 333 AGTTCACTATCGGTCAGTCA--GTAGTATTTAGCCTTGGA 370 ||| |||||||||| ||| || ||||||| ||| || Sbjct 409 TGTTTACTATCGGTC--TCATGGTTATATTTAGTCTTAGA 446 >seq5192 Length=1137 Score = 73.4 bits (80), Expect = 1e-10 Identities = 62/75 (83%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 273 GTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACT 332 |||||| | |||||| |||| | | | ||| ||||||||| ||||||||||||||||| Sbjct 357 GTTTCACGTACTATTTAACTCTC-TATTCGGAGTTCTTTTCAACTTTCCCTCACGGTACT 415 Query 333 AGTTCACTATCGGTC 347 ||| |||||||||| Sbjct 416 TGTTTACTATCGGTC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241432011520