Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3378 89.7 2e-12 >seq3378 Length=5191987 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 ||||||||||| ||||||| |||||| || ||||| |||| || ||| |||||||| ||| Sbjct 3336942 ATCTCCTTGAGCCTGGGCACGCCCAGTGTTACGTTTTTGGACGAGACACCGGCAAAATGG 3336883 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 || || | || |||| ||| ||| || ||||| | | |||| | || || ||| Sbjct 3336882 AAAGTGTTCAGTGTCATCTGGGTGGCCGGTTCGCCCAAACTCTGGGCGGCCAGTGCGCCA 3336823 Query 349202 ACCATCTCGCCGGG 349215 ||||| || || || Sbjct 3336822 ACCATTTCACCAGG 3336809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084368989406940