Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20willistoni_20[refseq_20GCF_5F000005925.1_202006-08-03] 14,838 sequences; 235,516,348 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq4775 338 2e-90 >seq4775 Length=16857 Score = 338 bits (374), Expect = 2e-90 Identities = 373/492 (76%), Gaps = 20/492 (4%) Strand=Plus/Minus Query 105 CAGT-GCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGA 163 |||| |||||||||| | | ||| | |||||||||||||||||||||||||||| Sbjct 16811 CAGTAGCTCTACCTCTATATAAATACATACAACGCTGCACCTAAATGCATTTCGGGGAGT 16752 Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223 || |||||| | ||||||||||||||||||||||| || ||||||||||| | || Sbjct 16751 ACGAGCTATTTCCGTGTTTGATTGGCCTTTCACCCCTACCCTCAGGTCATCCCAAGACTT 16692 Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 |||||| | | |||||||||||||||| || ||||| ||||||||||||||| || Sbjct 16691 TTCAACGTCAACGGGTTCGGTCCTCCACTATGTGTTACCACAGCTTCAACCTGCCCAAGG 16632 Query 284 ATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTT 343 |||||||| | |||| ||| ||| | ||| | |||||| || |||||||| Sbjct 16631 GTAGATCACACGGTTTCGCGTCCACCTCGACCAACTAGTTCGCCCTGTTAAGACTCGCTC 16572 Query 344 TCGCTACGGCTACCCCAC---ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTC 400 ||||||||| | | | | | | ||| |||||| | ||| ||||| |||||| Sbjct 16571 TCGCTACGGGTGCGCATCTGAAATGCTTACCCTCGC-TGGCCACGGTGACTCGTAGGCTC 16513 Query 401 ATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTG 460 ||| | ||||||||||||||||||| |||| | |||||||| | ||| Sbjct 16512 ATTATGCAAAAGGCACGCCGTCACC-----AATAAA-------TTGGCTCCGACCGCTTG 16465 Query 461 TAGGCACATGGTTTCAGGTACTATTTCACTCCC--CGCCAGGGGTACTTTTCACCTTTCC 518 ||||| ||||||||||| ||||||||||||| || |||| |||||||||||||| Sbjct 16464 TAGGCGTATGGTTTCAGGGTCTATTTCACTCCCTTATTCA-GGGTTCTTTTCACCTTTCC 16406 Query 519 CTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCG 578 |||||||||||||| | ||||||||| | |||||||||||| |||| ||| |||||||| Sbjct 16405 CTCACGGTACTTGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTAGCGGATGGTCCCG 16346 Query 579 CCAGATTCACAC 590 | |||||| || Sbjct 16345 CTTGATTCAGAC 16334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817330304512