Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20willistoni_20[refseq_20GCF_5F000005925.1_202006-08-03] 14,838 sequences; 235,516,348 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4775 255 1e-65 >seq4775 Length=16857 Score = 255 bits (282), Expect = 1e-65 Identities = 303/396 (77%), Gaps = 16/396 (4%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| | |||||||||||||| | || |||||| | ||| |||||||||| Sbjct 16693 TTTTCAACGTCAACGGGTTCGGTCCTCCACTATGT-GTTACCACAGCTT-CAACCTGCCC 16636 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGA 148 | ||| |||||| | |||||| || ||| | || | | ||||| |||||| ||||| Sbjct 16635 A-AGGGTAGATCACACGGTTT-CGCGTCCACCTCG-ACCAACTAGTTCGCCCTGTTAAGA 16579 Query 149 CTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCAC--TGAAAA---TAAGT 203 |||||| | ||||||| | | | || | | |||| || | || | | | | Sbjct 16578 CTCGCTCT-CGCTACGGGTGCGCA--TCTGAAATGCTTACCCTCGCTGGCCACGGTGACT 16522 Query 204 CGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGT 263 || | | |||||| ||||||| |||| |||||| || ||| ||| |||| || |||||| Sbjct 16521 CGTAGGCTCATTATGCAAAAGGCACGCCGTCACC-AATAAATTGG-CTCCGACCGCTTGT 16464 Query 264 ACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCT 323 | || || ||||||||| |||||||||||||| | | | ||||||||||| ||||||||| Sbjct 16463 AGGCGTATGGTTTCAGGGTCTATTTCACTCCCTTATTCAGGGTTCTTTTCACCTTTCCCT 16404 Query 324 CACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCC 383 ||||||||| |||||||||||||| |||| ||||||||||||| | |||||||||| | Sbjct 16403 CACGGTACTTGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTAGCGGATGGTCCCGCT 16344 Query 384 ATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| ||||| ||||| ||| ||||||| Sbjct 16343 TGATTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 16308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241415771392