Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20willistoni_20[refseq_20GCF_5F000005925.1_202006-08-03] 14,838 sequences; 235,516,348 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq4775 154 3e-35 >seq4775 Length=16857 Score = 154 bits (170), Expect = 3e-35 Identities = 219/306 (72%), Gaps = 4/306 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| | | |||||||| |||||| || |||||||||||||||||| Sbjct 1151 GGCATGGCTGGATCAGGCTCCCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAG 1092 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| || Sbjct 1091 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCCCCCTCTCAGGGCCCCTACCCAT 1032 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | ||||||| || ||| | ||||||| | ||||| || ||| |||||||| | Sbjct 1031 CGTTGCCTTGGTGTGCCGTTACCACACCAACAAGCTAATGGGACGCATACCCATCTTATA 972 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCC--ATCCTCTGACATTATGCGGTATTAGCGT 238 | | ||| | ||||||||| | | | | || |||| ||| ||| Sbjct 971 CCACCGTAGTTTTAAATATGTAATGATGCCAAAACATATTAC--TATGGGGTGTTAATCC 914 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||| || || | |||| |||||| ||| ||||| ||||||| | Sbjct 913 AAGTTTCCCTGGGCTATACCCCTGTATAAGGTAGGTTGTATACGCGTTACGCACCCGTGC 854 Query 299 GCCACT 304 |||||| Sbjct 853 GCCACT 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998251857408