Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20willistoni_20[refseq_20GCF_5F000005925.1_202006-08-03] 14,838 sequences; 235,516,348 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq4775 232 2e-58 >seq4775 Length=16857 Score = 232 bits (256), Expect = 2e-58 Identities = 306/420 (73%), Gaps = 17/420 (4%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||| | || | ||||||||||||||| |||||||| |||||||| Sbjct 1182 TTTACAACCCATAGGGCAGTCTCCTGCACGCGGCATGGCTGGATCAGGCTCCCGCCCATT 1123 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1122 GTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGT 1063 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 || | || |||||||| | ||| ||||| |||| |||| ||| ||||| | ||| Sbjct 1062 GGGGGATCCCCCTCTCAGGGCCCCTACCCATCGTTGCCTTGGTGTGCCGTTACCACACCA 1003 Query 185 ACTAGCTAATCCCATCTGGGTTCAT-CCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 || ||||||| || ||| || || | | | ||| || | | | | Sbjct 1002 ACAAGCTAAT------GGGACGCATACCCAT-CTTATACCACCGTAGTTTTAAATATGTA 950 Query 244 GTCTTGC---GACGT-----TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTC 295 | ||| || | |||| ||| ||| | |||||| || ||| ||||| Sbjct 949 ATGATGCCAAAACATATTACTATGGGGTGTTAATCCAAGTTTCCCTGGGCTATACCCCTG 890 Query 296 CATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAG 354 || ||| | ||| | | |||| ||||||| ||||||||| | || ||| |||||| Sbjct 889 TATAAGGTAGGTTGTATACGCGTTACGCACCCGTGCGCCACTCGCCGGCAAAGGAGCAAG 830 Query 355 CTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || ||||| | | ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 829 CTCCTTCCCGCTGCCGTTCGACTTGCATGTGTTAGGCCTGCCGCTAGCGTTCATCCTGAG 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222218620288