Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20willistoni_20[refseq_20GCF_5F000005925.1_202006-08-03] 14,838 sequences; 235,516,348 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4775 221 3e-55 >seq4775 Length=16857 Score = 221 bits (244), Expect = 3e-55 Identities = 184/224 (82%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 79 ATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGAC 138 ||||||| ||||||||| || ||| | || |||| ||||| | ||||||| |||| | Sbjct 1192 ATAAAAGCAGTTTACAACCCATAGGGCAGTC-TCCTGCACGCGGCATGGCTGGATCAGGC 1134 Query 139 TCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTC 198 || || |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 1133 TCCCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTC 1074 Query 199 AGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCG 258 ||| ||| ||||||||| | |||||||| |||||| ||||||| | || |||| |||| Sbjct 1073 AGTACCAGTGTGGGGGATCCCCCTCTCAGGGCCCCTACCCATCGTTGCCTTGGTGTGCCG 1014 Query 259 TTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACC 302 ||||| | || || | ||||||| |||||| |||||| || ||| Sbjct 1013 TTACCACACCAACAAGCTAATGGGACGCATACCCATCTTATACC 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068641411456