Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27]
8,123 sequences; 165,709,965 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq5924 82.4 5e-14
seq4239 82.4 5e-14
seq7834 78.8 6e-13
seq7734 78.8 6e-13
seq7659 78.8 6e-13
seq5212 78.8 6e-13
seq4568 78.8 6e-13
seq4327 78.8 6e-13
seq4199 78.8 6e-13
seq2875 78.8 6e-13
seq2235 78.8 6e-13
seq1166 78.8 6e-13
seq119 78.8 6e-13
seq2 78.8 6e-13
seq3402 77.0 2e-12
seq6037 75.2 7e-12
seq2016 75.2 7e-12
seq6011 73.4 2e-11
seq5786 73.4 2e-11
seq5092 73.4 2e-11
seq2787 73.4 2e-11
seq2688 73.4 2e-11
seq3923 71.6 8e-11
>seq5924
Length=16199
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| | ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 11278 CTCACTAAACAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 11221
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 11220 TAAT-CAATGCGAG 11208
>seq4239
Length=7876
Score = 82.4 bits (90), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| | ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 4523 CTCACTAAACAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 4466
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 4465 TAAT-CAATGCGAG 4453
>seq7834
Length=5371
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 4465 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 4408
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 4407 TAAT-CAATGCGAG 4395
>seq7734
Length=10261
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 9885 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 9828
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 9827 TAAT-CAATGCGAG 9815
>seq7659
Length=5068
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 3963 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3906
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 3905 TAAT-CAATGCGAG 3893
>seq5212
Length=1187
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1057 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1114
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 1115 TAAT-CAATGCGAG 1127
>seq4568
Length=27161
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 17290 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 17233
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 17232 TAAT-CAATGCGAG 17220
>seq4327
Length=7605
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 219 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 162
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 161 TAAT-CAATGCGAG 149
>seq4199
Length=1286
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 709 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 766
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 767 TAAT-CAATGCGAG 779
>seq2875
Length=4851
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1310 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1367
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 1368 TAAT-CAATGCGAG 1380
>seq2235
Length=1395
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1108 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1165
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 1166 TAAT-CAATGCGAG 1178
>seq1166
Length=9258
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 6463 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 6406
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 6405 TAAT-CAATGCGAG 6393
>seq119
Length=24197627
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 23965888 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 23965945
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 23965946 TAAT-CAATGCGAG 23965958
>seq2
Length=172766
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 50287 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 50344
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 50345 TAAT-CAATGCGAG 50357
>seq3402
Length=21433
Score = 77.0 bits (84), Expect = 2e-12
Identities = 57/64 (89%), Gaps = 2/64 (3%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1075 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1132
Query 109 TAAT 112
||||
Sbjct 1133 TAAT 1136
>seq6037
Length=13794
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 3479 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3422
Query 109 TAA 111
|||
Sbjct 3421 TAA 3419
>seq2016
Length=3978
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 2456 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 2399
Query 109 TAA 111
|||
Sbjct 2398 TAA 2396
>seq6011
Length=1259
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||| ||||
Sbjct 1125 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGTGACG 1182
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 1183 TAAT-CAATGCGAG 1195
>seq5786
Length=1851
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||| ||||
Sbjct 598 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGTGACG 541
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 540 TAAT-CAATGCGAG 528
>seq5092
Length=1699
Score = 73.4 bits (80), Expect = 2e-11
Identities = 56/64 (88%), Gaps = 2/64 (3%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||| ||||
Sbjct 1233 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGTGACG 1290
Query 109 TAAT 112
||||
Sbjct 1291 TAAT 1294
>seq2787
Length=5650
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 4275 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 4218
Query 109 TAATACAACGCAAG 122
| || ||| || ||
Sbjct 4217 TTAT-CAATGCGAG 4205
>seq2688
Length=9544
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct 8549 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGTCGGTGTGTACAAAGGGCAGGGACG 8606
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 8607 TAAT-CAATGCGAG 8619
>seq3923
Length=1648
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1019 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACC 1076
Query 109 TAA 111
|||
Sbjct 1077 TAA 1079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300777093140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |