Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq61 98.7 4e-15 >seq61 Length=22324452 Score = 98.7 bits (108), Expect = 4e-15 Identities = 186/272 (68%), Gaps = 14/272 (5%) Strand=Plus/Minus Query 21633 ACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCT---CGCCCTTT 21689 || || || |||||| ||||| |||||||||||| ||| || | || | || || | Sbjct 7404318 ACTCCGGTAGAGCCAAATCCTGCCTCGCCGCGCTCGGTGTCCTCCAGTTTGTCGACCAT- 7404260 Query 21690 TGCGCCTGCTGCAAAACTGGGGTCGA-GATGCGTTCCAGGATGAGTTGGGCGATGCGATC 21748 | || | ||| || | || |||||| || |||| ||||||||||| || Sbjct 7404259 --CACCAGTTGC-------GGATAGAAGATGCGCTCGCATATGAACTGGGCGATGCGGTC 7404209 Query 21749 GCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCC 21808 ||| ||||| | || || || || ||||| ||||| || || || |||| ||||| Sbjct 7404208 GCCGTGCTTCACCTCGAAATCTACATCGGAGTGATTGAACAGAACGACGCCGAGATTGCC 7404149 Query 21809 CCTATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACC 21868 | |||| ||| || || |||||||| || |||| |||||||| ||| || || Sbjct 7404148 GCGATAATCCTCGTCCACCACGCCGGCGCCCACATCGATGAAGTTCTTCACGGCAAGTCC 7404089 Query 21869 CGATCTGGGAGCGACGCGGCCGTAGTGGCCCT 21900 || | || || || ||||||||| ||||| Sbjct 7404088 GGAACGTGGGGCCACCCGGCCGTAGGAGCCCT 7404057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084516936833154