Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq152723 288 2e-73 seq191967 221 3e-53 seq158708 199 1e-46 seq111225 149 2e-31 seq350402 140 8e-29 >seq152723 Length=59854 Score = 288 bits (318), Expect = 2e-73 Identities = 285/369 (77%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 12174 TGACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCC 12233 ||||||| ||||| || |||| ||| || || || || || |||| |||||||| Sbjct 9673 TGACACCACCATCACGGTCGTCGGAAACTTGACCGCCGATCCAGAACTGCGCTTCACGCC 9614 Query 12234 GGCCGGTGCTGCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCA 12293 | |||| |||||||||||||||||||| || ||||| || || |||| |||||| || Sbjct 9613 GTCCGGGGCTGCCGTCGCCAACTTCACTGTGGCGTCGACTCCCCGCATCTTCGACCGACA 9554 Query 12294 GGCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGC 12353 | |||||||||||||| |||||||||||| |||| ||| | | ||||||||||| Sbjct 9553 GAGTTCGGAGTGGAAGGACGGAGAGGCGCTGTTCCTGCGGTGCAATATCTGGCGTGAGGC 9494 Query 12354 CGCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCT 12413 ||| |||||||| ||||||||| || | || || || || ||||||||||| ||| ||| Sbjct 9493 CGCTGAGAACGTGGCCGAGAGCCTGACCCGCGGGTCCCGTGTCATCGTCACTGGCCGGCT 9434 Query 12414 CAAGTCCCGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGT 12473 |||| ||| ||||||| || || ||||| |||||||| || ||||| || | ||||| Sbjct 9433 CAAGCAGCGCTCCTTCGAAACCCGCGAGGGCGAGAAGCGCACTGTCATGGAGGTCGAGGT 9374 Query 12474 CGACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCCACCGTGAACAAGGCCAACCGCGG 12533 ||||||||||||||| || || ||||| ||||||| || ||||||||| ||||| Sbjct 9373 CGACGAGATCGGCCCGTCTCTGCGGTACGCGACCGCCAAGGTCAACAAGGCCTCGCGCGG 9314 Query 12534 CGGGGGAGG 12542 || || || Sbjct 9313 TGGTGGCGG 9305 >seq191967 Length=4721 Score = 221 bits (244), Expect = 3e-53 Identities = 245/327 (75%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 12184 ATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCT 12243 ||||| || |||| |||||| || ||||| |||| ||||| || ||||||| Sbjct 3145 ATCACGGTCGTCGGGAACCTGACAAGCGATCCCGAACTGCGCTTCACACCCAACGGTGCT 3086 Query 12244 GCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAG 12303 || ||||| ||||||||||| || || |||||||| | |||||| ||||| |||||| Sbjct 3085 GCTGTCGCAAACTTCACCGTGGCCTCGACGCCGCGTATCTTCGACCGTCAGGCCAACGAG 3026 Query 12304 TGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAAC 12363 | ||||||||||| | |||||| |||||||| ||| |||||||| | |||||| Sbjct 3025 TTCAAGGACGGGGAAACCCTGTTCCTGCGCTGCTCGGTCTGGCGTGAAATGGGAGAGAAC 2966 Query 12364 GTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCCCGC 12423 |||||||| | || |||||| | ||||||||||| ||| ||| ||||| || Sbjct 2965 GTCGCCGAATCCCTGCAGCGGGGTACCCGGGTCATCGTGCAGGGCCGGCTGAAGTCACGG 2906 Query 12424 ACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAGATC 12483 ||||||| || || || || ||||| |||||||| |||||||| |||||||| || Sbjct 2905 TCCTTCGAAACCAAGGAAGGCGAAAAGCGCACCGTCATGGAACTGGACGTCGACGAAGTC 2846 Query 12484 GGCCCCAGCCTCCGCTACGCCACCGCC 12510 ||||||||||| || ||| |||||| Sbjct 2845 GGCCCCAGCCTGCGACGCGCAACCGCC 2819 >seq158708 Length=1411 Score = 199 bits (220), Expect = 1e-46 Identities = 243/329 (74%), Gaps = 2/329 (1%) Strand=Plus/Plus Query 12184 ATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCT 12243 ||||| ||||||| |||||| || || || ||| | |||||||| || | || || Sbjct 660 ATCACGGTCATCGGGAACCTGACCGCCGATCCGGAGCTCCGGTTCACCCCCTCGGGGGCG 719 Query 12244 GCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAG 12303 || || ||||||||||| |||||||| || |||||||| |||||| | | | |||||| Sbjct 720 GCGGTGGCCAACTTCACGGTCGCGTCGACACCGCGCACCTTCGACCGGAACACCAACGAG 779 Query 12304 TGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAAC 12363 ||||||||||| || ||||||||| | || ||| | | ||||||||||||||||||||| Sbjct 780 TGGAAGGACGGCGAAGCGCTGTTCCTCCGGTGCAACATCTGGCGTGAGGCCGCCGAGAAC 839 Query 12364 GTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCCCGC 12423 || || ||| | | | |||| | ||||| ||||| |||| |||||| || Sbjct 840 GTGGCGGAGTCCCTCACCAAGGGCACCCGGGTGATCGTGTCCGGTCGTCTCAAGCAGCGT 899 Query 12424 ACCTTCGA-GACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAGAT 12482 | ||||| ||| || ||||| || || || || | || || ||||| |||||||| Sbjct 900 TCGTTCGACGAC-CGCGAGGGCCAGCGCCGCACGGTGGTGGAGCTCGAGGTAGACGAGAT 958 Query 12483 CGGCCCCAGCCTCCGCTACGCCACCGCCA 12511 ||| ||| ||| || || ||||| |||| Sbjct 959 CGGTCCCTCCCTGCGGTATGCCACGGCCA 987 >seq111225 Length=1590 Score = 149 bits (164), Expect = 2e-31 Identities = 224/310 (72%), Gaps = 14/310 (5%) Strand=Plus/Minus Query 12207 GGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCTGCCG-TCGCCAACTTCACCGTCG 12265 ||| ||||||||| |||| | ||||| | ||| ||||||| | || ||||||||| ||| Sbjct 1352 GGCCGACCCCGAGCTGCGTTACACGCAGAACGG-GCTGCCGGTGGCGAACTTCACCATCG 1294 Query 12266 CGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAGTGGAAGGACGGGGAGGCGCTGT 12325 | || || ||||| || |||||| ||||||||||||||||||||||| || ||||||| Sbjct 1293 CCTCGACCCCGCGGACCTTCGACCGCCAGGCGAACGAGTGGAAGGACGGCGAAGCGCTGT 1234 Query 12326 TCAT--GCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAACGTCGCCGAGAGCT---TGTC 12380 || | | || || |||||||| ||| ||||||| |||| || | ||| || | Sbjct 1233 TCCTCCGGGCGTCC--GTGTGGCGCGAGTTCGCCGAGCACGTGGC---GGGCTCGCTGAC 1179 Query 12381 GCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTC-CCGCACCTTCGAGACGCGTG 12439 |||| ||| || | | | | || | ||| ||| ||| | || |||| Sbjct 1178 CAAGGGCATGCGTGTGGTTG-CGCAGGGCCGTCTGCGTCAGCGCTCCTACCAGGACCGTG 1120 Query 12440 AGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAGATCGGCCCCAGCCTCCGCT 12499 |||| | || || || | |||||| || ||||||||||||||||| || ||||||| Sbjct 1119 AGGGCAACAACCGCACGGCCATCGAGCTCGAGGTCGACGAGATCGGTCCGTCGCTCCGCT 1060 Query 12500 ACGCCACCGC 12509 |||| ||||| Sbjct 1059 ACGCGACCGC 1050 >seq350402 Length=1273 Score = 140 bits (154), Expect = 8e-29 Identities = 230/329 (70%), Gaps = 2/329 (1%) Strand=Plus/Minus Query 12184 ATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCT 12243 || ||| | ||||| |||||| || || || ||| |||| ||||||||| ||||| | Sbjct 1248 ATTACCGTTATCGGAAACCTGACCGCCGATCCGGAGCTGCGTTTCACGCCGTCCGGTTCA 1189 Query 12244 GCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAG 12303 ||||| || ||||| || |||| || || || ||||| || ||| ||| | || ||| Sbjct 1188 GCCGTAGCGAACTTTACGATCGCTTCGACTCCTCGCACCTTTGACCGCCAGTCCAATGAG 1129 Query 12304 TGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAAC 12363 |||||||||||||| || |||||| ||||| ||| ||||| ||||| || |||||| Sbjct 1128 TGGAAGGACGGGGAAGCCCTGTTCTTGCGCGCATCGGTATGGCGCGAGGCTGCAGAGAAC 1069 Query 12364 GTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAG-TCCCG 12422 || || || | || | |||| ||| ||||||| | | || | | | || || Sbjct 1068 GTTGCTGAAACGCTGACCAAGGGCATGCGCGTCATCG-CTCAGGGTCGTTTGCGTTCACG 1010 Query 12423 CACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAGAT 12482 | | ||| || || || || ||| ||||| || || || || ||||| || || Sbjct 1009 TTCTTACGACACCAAGGAAGGCGAACGGCGCACCGTTATGGAGCTCGAAGTCGATGAAAT 950 Query 12483 CGGCCCCAGCCTCCGCTACGCCACCGCCA 12511 |||||| ||||||| || |||||| Sbjct 949 CGGCCCGTCGCTCCGCTTTGCGTCCGCCA 921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125660079350016