Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value SEQ13123 176 1e-39 SEQ57304 141 3e-29 seq127735 129 2e-25 >SEQ13123 Length=2313 Score = 176 bits (194), Expect = 1e-39 Identities = 297/425 (70%), Gaps = 14/425 (3%) Strand=Plus/Plus Query 2495 ACTACCTTGAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACG 2554 ||| ||| ||||| || || | ||||||||| | |||||||||| || |||| | Sbjct 486 ACTTCCTGGAAGAGCTGACCAAACAGTACCCAATCGTGTCTATCGAAGACGGCCTGGATG 545 Query 2555 AAAACGACTGGGACGGTTGGAAATCTCTTACTGAAC----GT-CTTGGTGGTAAAGTTCA 2609 || |||||||| || | || ||||| || || || || | ||| | || Sbjct 546 AATCCGACTGGGCGGGCT-----TCGCTTACCAGACCAAAGTGCTGGGCGACAAAATCCA 600 Query 2610 ATTGGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGA 2669 |||| || ||||| | ||||| || ||||| ||| || |||| || | ||| Sbjct 601 GCTGGTGGGCGACGATCTGTTCGTGACCAACACCAAGATCCTGAAAGAAGGCATCG-AGA 659 Query 2670 ACACGCT--GCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACT 2727 | | || |||||||| ||||| ||||| | ||||| |||||| || |||| ||||| Sbjct 660 A-AGGCATCGCTAACTCCATCCTGATCAAGTTCAACCAGATCGGTTCTCTGACCGAAACG 718 Query 2728 TTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCA 2787 | | |||||| | ||||||||||| || || ||||| || || | || |||||||| Sbjct 719 CTGGCGGCTATCAAGATGGCGAAAGACGCCGGCTACACTGCGGTGATCTCTCACCGTTCC 778 Query 2788 GGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATT 2847 |||||||| ||||| |||| ||||| || | || || | ||| ||||| || || Sbjct 779 GGTGAAACCGAAGACGCAACCATCGCCGACCTGGCGGTAGGGACTGCAGCTGGCCAGATC 838 Query 2848 AAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATC 2907 || || ||||| || ||| ||||||| |||| || ||||||||| || | || ||| Sbjct 839 AAAACCGGTTCCATGAGCCGTTCTGACCGCGTTGCCAAGTACAACCAACTGATCCGCATC 898 Query 2908 GAAGA 2912 ||||| Sbjct 899 GAAGA 903 >SEQ57304 Length=1660 Score = 141 bits (156), Expect = 3e-29 Identities = 255/368 (69%), Gaps = 6/368 (2%) Strand=Plus/Minus Query 27911 GAAATTGCAGCGGCTAAGAAGTCAATGCAAGATTATGCAACTCAAACAATCTACTCCGCC 27970 ||||||| | | ||| || ||| ||||||| | ||| || || |||||||| || || Sbjct 1502 GAAATTGACGGTGTTAAAAACTCACTGCAAGACTTTGCGACACAGACAATCTATTCAGCA 1443 Query 27971 TCAGACATGGGGACCACATTCTCACAAATGGCCGCGATTGGTCGAAGTGATGCAGGGGCA 28030 || || |||| || |||| | | |||||||| | ||||| | | | | || Sbjct 1442 TCGGATATGGCGAGTACATACGCGCAAATGGCATCAGTTGGTT-ATGACAATAGCGAACA 1384 Query 28031 -TTAGTTAAGGCTATGGGTGGCCTTGCTGCGTCTGCTGAGAATCCCAAGCAGGCAATGAA 28089 ||||| || | ||||||||| | || ||| ||||||| || || || || ||||| Sbjct 1383 GTTAGTAAAAGGTATGGGTGGTATAGCAGCGGCTGCTGAAAACCCAGCCCAAGCGATGAA 1324 Query 28090 AACATTGAGCCAGCAAATGGTCCAGGCAATGACCAAGCCTACCATCCAATGGCAAGATTT 28149 ||| || || || |||||| || || | ||||| || || || |||||||| || Sbjct 1323 AACGTTAAGTCAACAAATGACACAAGCCCTAACCAAACCAGAAATGCAGTGGCAAGACTT 1264 Query 28150 CAGGTTGATGATGGATCAATCACCTGCTGGTATGGCCGCCGTCGCTAGAGAGATGGGAAT 28209 || |||||| | || |||||||| || |||||| | || || |||| ||| ||||| || Sbjct 1263 TAGATTGATGCTAGAACAATCACCAGCGGGTATGTCGGCAGTTGCTAAAGAAATGGGCAT 1204 Query 28210 GTCTCTGGATGACCT--TGTAAGCAAAATTCAAAACGGCGAAATTAAGACAGAGGACTTT 28267 | | ||||| | ||| || | | ||| | |||||||||| || | |||||| Sbjct 1203 GAGCTTAGATGAATTGGTGTTGGCTA--TCCAAGATGGCGAAATTAGTTCACAAGACTTT 1146 Query 28268 GCGGAAGC 28275 ||||| || Sbjct 1145 GCGGATGC 1138 >seq127735 Length=1853 Score = 129 bits (142), Expect = 2e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 12475 CTTTCAGTCTTGCGGTTAACCGTAATTTTAAAGACGCTAACGGAGAGCGTGAAACTGACT 12534 |||| | || || |||||||| ||||||| | || || || |||||| | |||| Sbjct 602 CTTTTACACTAGCAGTTAACCGGAATTTTACGAATCAAAATGGCGAACGTGAAGCAGACT 543 Query 12535 TTATTAACTGTGTCATTTGGCGACAACAGGCTGAAAATTTGGCTAACTGGGCCAAAAAAG 12594 |||| | ||||| |||||||| ||| || |||| ||| || |||| | ||||| Sbjct 542 ATATTCAGTGTGTGATTTGGCGTAAACCTGCAGAAACTTTAGCAAACTATACACGAAAAG 483 Query 12595 GGGCATTGATTGGCATTACTGGACGCATTCAAACACGTAGCTACGAGAATCAGCAAGGTC 12654 | |||||||||| || || | |||||||||||| ||| |||||||| ||||| | Sbjct 482 GAACATTGATTGGTCTTGTGGGTAGACTTCAAACACGTAACTATGAGAATCAACAAGGAC 423 Query 12655 AACGAGTATATGTGACAGAAGTTGTCGCTGAAAATTTTCAAATGCTAGA 12703 |||| | |||||||||||||| || | |||| || ||| || |||| Sbjct 422 AACGTATTTATGTGACAGAAGTGGTTGTAGAAAGCTTCCAATTGTTAGA 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155376731647872