Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_029107.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq219735 170 5e-38 seq121209 131 4e-26 seq286239 80.6 7e-11 >seq219735 Length=5934 Score = 170 bits (188), Expect = 5e-38 Identities = 578/876 (66%), Gaps = 56/876 (6%) Strand=Plus/Minus Query 16440 CGCATCCTGGAGGATGCGGAGCGCGGCAACCTGCAGGCGCAAACCGAGCTGTTCCAGGAC 16499 |||||| || |||| || |||| || | || ||||| | || ||||| ||||| Sbjct 2022 CGCATCATGCAGGAGGCCGAGCAGGGTTATCTTTCCGCGCAGGCGGACCTGTTTGAGGAC 1963 Query 16500 ATGGAGGAACGGGACGCACACATCTTTGCGGAGATGAGCAAGCGCAAGCGCGCGGCGCTC 16559 |||| ||| |||| |||||||| | |||||| ||||||||| |||| | | Sbjct 1962 ATGGTGGAGAAAGACGGCCACATCTTCTCAGAGATGGCCAAGCGCAAAAACGCGCTGTTG 1903 Query 16560 AACATCGAATGGACCATCGAA--CCGCCGTTGAATCCGACCGCCGAGGAAAAGAGTCAGA 16617 | |||| |||| ||| ||| |||||| || | || ||||||| ||| | Sbjct 1902 GGCCTCGACTGGAGCATTGAAACCCGCCGC--AACGCCACTCCCGAGGAGCAGAACCTCG 1845 Query 16618 CGGACATGCTCCGTGAACTGGTGGCGGATATCCCCGGCAAA---GAGGACATGATTCTGG 16674 ||| |||| | | || |||| |||| | || ||| ||||| || || ||| Sbjct 1844 CGGCCATGGTGCAGGAG-TGGTTC--GATACGCTCGACAACCTGGAGGATATTATCCTGC 1788 Query 16675 ACGCCCTGGACGGCATCGGACACGGGTTCTCCATGCAGGAAATCGAGTGGCA----GCAG 16730 | || ||||| |||||| ||||||||| | ||||| | |||||| | | || Sbjct 1787 AGGCGGCGGACGCCATCGGCCACGGGTTCAGCTGTCAGGAGCTGGAGTGGGAAAACGAAG 1728 Query 16731 ATCGGCAAGAACTGGCTGCC--CAAGGCGCTGCACCACCGGCCGCAATCCTGGTTTCAGG 16788 | || | | |||||| || | | ||| |||| || ||||| |||||| |||| Sbjct 1727 A--GG--ATATCTGGCTCCCGTCTAC-CGCC-CACCTGCGCCCGCACCGCTGGTTCCAGG 1674 Query 16789 TC--TCCCGCTTTGACCAGAACGTCCTGCACCTGCGCGACCACTCGCCG----GACGGGG 16842 ||| | | || | | | | | ||| ||| | || | || || | Sbjct 1673 CGCGTCCGGATATGGGCG--ATGCTATCCGCCTTTCCGA----TGGCAGCATCGAGGGCG 1620 Query 16843 CTGAGCTGATCCCGTTTGGCTGGATCAAGCACGTTCACAAAGCCAAGTCGGGCTATATGG 16902 |||| || ||||| |||||||| |||| ||| ||||| |||||| || | Sbjct 1619 CTGAACTCTGGCCGTTCGGCTGGATGGTGCACAAGCACGCCGCCAAAACGGGCTTTACCG 1560 Query 16903 CTCGCGCCGGCCTGCACCGCGTGCTGGCCTGGCCGTACCTGTTCAAGACCTACGCGGTGC 16962 | | ||||| |||||||||||| |||||||||||||||||||| || || | Sbjct 1559 GACAGTCTGGCCTTTACCGCGTGCTGGTCTGGCCGTACCTGTTCAAGAACTTTGCCACCC 1500 Query 16963 GCGACCTGGCCGAGCTGCTGGAGATTTACGGCATGCCCATCCGGCTGGGGAAGTACCCGA 17022 | ||||| || ||| | |||||||||||||| ||||| || | || | ||| | Sbjct 1499 GTGACCTTGCGGAGTTCCTGGAGATTTACGGTCTGCCCGCGCGCGTCGGCACCTACATGG 1440 Query 17023 GCGGCGCGGGCGACAAGGAAAAGGCCGCACT----GCTGCG-TGCAGTCACCCAACTGGG 17077 ||| || ||| || |||| ||| || | ||| || || | | |||| Sbjct 1439 CCGGGGCCACCGAAGGCGACAAGGACGCGCTCTATGAGGCGCTG--GTGATGC---TGGG 1385 Query 17078 CCACGCGGCGGCCGGCATCATCCCCGACGGCATGAACATCGAATTCCAGGCCGCAAGCAC 17137 ||| || | ||||||||||| | |||| | ||| || ||| || | || || Sbjct 1384 CCATAACGCATCGGGCATCATCCCACAGGGCACCAGCATTGAGTTCAAGACGGCCGCCAG 1325 Query 17138 CGG-CA--CTGAAGTCCCGTTCGAAACCATGTACGACATGATG-GAGCGG--GCCGAGTC 17191 ||| || |||| |||||||| ||||| ||| || || ||||| || |||| Sbjct 1324 CGGTCAGGCTGA---CCCGTTCGTCGCCATGATTGAC-TGGTGCGAGCGCACGCAGAGT- 1270 Query 17192 CAAAGCGATCCTGGGAGGCACGCTGACCAGCCAGGCGGACGGCAAGACTTCGACCAATGC 17251 || | || || || | |||||||||||||||||||||||| || || || ||||| || Sbjct 1269 -AAGGTCATTCTCGGTGCCACGCTGACCAGCCAGGCGGACGGTAAAACCTCCACCAACGC 1211 Query 17252 GCTGGGCAACGTCCACAACGAAGTGCGCCACGACAT 17287 ||| |||||||| |||||||| |||||||||||||| Sbjct 1210 GCTCGGCAACGTGCACAACGACGTGCGCCACGACAT 1175 >seq121209 Length=3652 Score = 131 bits (144), Expect = 4e-26 Identities = 264/384 (69%), Gaps = 6/384 (2%) Strand=Plus/Plus Query 9088 GCGTTCGTCAAGCTGTCAGCCGAGGAGTACGGCGTCCAGCGCGGCGGCAGCAAAGGCAAC 9147 |||||||| | ||||| ||| | || || || || || ||||| | |||||||| Sbjct 3137 GCGTTCGTTGACCTGTCTGCCAATGAATATGGTGTGTCGCTGGGCGGTAAAAAAGGCAAT 3196 Query 9148 GTGACCCTCCACAGCTTCGACGGCCGTTACAAGGTCCGACTGGCCCATGCCG-ACACCAT 9206 || || ||| |||| || || ||||| || ||| | | | || |||| | || || Sbjct 3197 GTCACACTCTACAGTTTTGATGGCCGCTATAAGATTCAGCGTGCT-ATGCAGGACCGTAT 3255 Query 9207 GAAGTTTGACGAGCGTCTGCAGGCCGCCAAGACCATCATTGACGACCTGATGACCGAGTG 9266 ||| || ||||| |||||||| || || | | ||||| || || |||| || Sbjct 3256 CGCGTTCGATGAGCGCCTGCAGGCGGCAAAATCGCTGATTGATGAGTGCCTGTCCGACTG 3315 Query 9267 GACAGAGGGATCGCGCCCCGAAATCAAGGCCATCATCCAGCGCGCTTTCGACACCGACAA 9326 ||| || || |||| || || ||| | |||||||| | ||||| ||| | || || || Sbjct 3316 GACCGAAGGTGCGCGTCCGGAGATCCACGCCATCATTAACCGCGCCTTCCAGACTGAGAA 3375 Query 9327 AGAGGGCAACTTGAACACCGGCCGCGTGCTGTCGCTGCGCAGTCTGGACATCAAGGATGC 9386 || ||| | | ||||||| | ||||||| | |||||| | ||||| || | || | Sbjct 3376 GGAAGGCGAAGTAAACACCGCCGCCGTGCTGGCACTGCGCCGCCTGGAAATTGATGACGA 3435 Query 9387 GCGTTGGCAGCA-GGCGATGACCGCGATTGGCGACAGC-GTCCAGGTCGTGGGCACCAAG 9444 ||| ||| |||| ||| ||| ||||||||||| ||| || ||||| || || | Sbjct 3436 GCGCTGG-AGCAAGGCCATGCAGGCGATTGGCGA-AGCGGTTCAGGTGGTCGGAAGTCGT 3493 Query 9445 AGCTACGTGCGCTTCTATGAGCGC 9468 |||| | ||| | ||||||||| Sbjct 3494 TCCTACATCCGCGTTTATGAGCGC 3517 >seq286239 Length=3637 Score = 80.6 bits (88), Expect = 7e-11 Identities = 91/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 20777 GACTACGAACACCAGACGCTCAACGCCGAGAAGAACGGCTTGCCCGCGCCTGCGGCCGGC 20836 || ||||| || ||||| || || | |||||||||| ||| || || || | ||| Sbjct 1958 GATTACGAGCATCAGACCCTGCGTGCGGCGAAGAACGGCCAGCCTGCTCCGGCCTCTGGC 1899 Query 20837 TGGTTCAAGGCAATGCAGTGGCGCGACGGTGTCGGCTTGTTCGCCACAGACGTGGACTGG 20896 ||||||||| | || |||||||||| || | ||| |||| ||||| | ||| |||||| Sbjct 1898 TGGTTCAAGCAACTGGAGTGGCGCGAAGGCGAAGGCCTGTTTGCCACCGGCGTTGACTGG 1839 Query 20897 AC 20898 || Sbjct 1838 AC 1837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133521003778368