Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq473 86.0 3e-15 seq376 84.2 1e-14 seq295 75.2 5e-12 seq443 71.6 6e-11 >seq473 Length=32739 Score = 86.0 bits (94), Expect = 3e-15 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| | ||||||||| Sbjct 26002 GGAAAAGAAACTAACAAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAATGAGCCCAGCA 25943 Query 61 CCGAATCC--CCGCCCCGCGGTGGGG 84 | |||||| | | |||| |||||| Sbjct 25942 CTGAATCCCACGGTTCCGCCGTGGGG 25917 >seq376 Length=25404 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| | ||||||||| Sbjct 528 GGAAAAGAAACTAACAAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAACGAGCCCAGCA 587 Query 61 CCGAATCCC 69 | ||||||| Sbjct 588 CTGAATCCC 596 >seq295 Length=121342 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| | ||||||||| Sbjct 62956 GGAAAAGAAACTAACAAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAATGAGCCCAGC 62898 >seq443 Length=7598 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| ||||||||| Sbjct 6745 GGAAAAGAAACTAACAAGGATTTCCTTAGTAGCGGCGAGCGAACAGGATTGAGCCCAGC 6803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230390975520