Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq143 114 9e-21 >seq143 Length=5469012 Score = 114 bits (126), Expect = 9e-21 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 ||||||| || || || ||||||||||| || | |||| | || || |||||||||||| Sbjct 4939299 GATGATGCAAGGATGTGCAAAATTTGTTACAACGGAGAATTAGGAGTGGTATTTTTACCG 4939240 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| ||||| || || ||| |||||||||| || || |||| | |||| |||| || Sbjct 4939239 TGTGGACATATAGTTGCGTGTGTTAAATGTGCTCCTGGTATGACAACTTGTGCAGTATGC 4939180 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | |||| || | |||| ||||| | ||||| ||||| Sbjct 4939179 AGAGAACCTGTTACTATGACCGTACGAGCCTTCTTCTCATA 4939139 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 11/235 (5%) Strand=Plus/Minus Query 25598 TTGCAAAAGCTGGATTGTATTATATTGGTGAAAATGATAGTGTTAAATGTTTTGAATGTA 25657 ||||| |||||||| ||||||| ||||||| ||||| || | |||||||||||| Sbjct 4940238 TTGCAGCTGCTGGATTTTATTATACTGGTGAAGGTGATAAAGTAAGATGTTTTGAATGCT 4940179 Query 25658 ACGTTACTATTATG-AAATGGGAAGAAGATGATGAACCTTTAGCATGTCATAAAAGATGG 25716 | | || | |||| | |||| ||||| |||| | ||| | | |||| || | ||| Sbjct 4940178 ATG-TAGAAATATGCCAGTGGGTAGAAGGTGATAATCCTATGGTCGATCATCAACGCTGG 4940120 Query 25717 TCTGCAAGATGTCGATTTATTAGAAAAATTGCTTGTGGAAATGTTCCAATAGGTATTGAT 25776 || ||||||||| |||||||| | ||||| ||||| ||||| ||||| || ||| Sbjct 4940119 TCGGCAAGATGTAGATTTATTCGTAAAATGAACTGTGGTAATGTCCCAATTGGAGCAGAT 4940060 Query 25777 CCAAATACAGT------ACCAATTCCTAAAAGGAGTTATGATGTATGTGGATCTT 25825 || | |||||| ||||| || ||| ||| |||||||||||| ||| Sbjct 4940059 CCTAGTACAGTTTTACCACCAAGGCC---AAGAAGTAGAGATGTATGTGGACCTT 4940008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356506645980012