Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq4354 152 6e-35 seq5381 138 1e-30 seq3276 129 6e-28 seq1246 125 8e-27 seq2128 111 2e-22 seq939 102 9e-20 >seq4354 Length=3557 Score = 152 bits (168), Expect = 6e-35 Identities = 155/200 (78%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||||||||| Sbjct 2784 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTCTGCAATCAGAC 2725 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||||| | ||||| | ||| || || | || ||| |||||||||||| ||| Sbjct 2724 CTCGTTAATTCAACTTAACATACACTTGGGGACCTTAGCTGTTGGTCCGGATTCTTTTCC 2665 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGC-GCATT 179 |||||| | ||||||||| ||||| ||||||||| | ||| | | ||| ||||| Sbjct 2664 TCTCGGACGCGGACCTTAGCACCCGCGCCCTCACT--CCCGGTGAGCATTTTGCAGCATT 2607 Query 180 CGGAGTTTGGCAGGACTTGA 199 ||||||||| | ||| |||| Sbjct 2606 CGGAGTTTGTCTGGAGTTGA 2587 >seq5381 Length=4748 Score = 138 bits (152), Expect = 1e-30 Identities = 150/198 (76%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| || ||| || Sbjct 2812 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTCTGCAGTCAAAC 2753 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||||| | ||||| | | |||| || | || | || |||| || ||||| || Sbjct 2752 CTCGTTATTTCAACTTAGCATATATTTTGGGACCTTAGCCGATAGTCTGGGTTCTTTCCC 2693 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| ||||||||||||||||| | || | || |||||| Sbjct 2692 TCTCGGACATGGACCTTAGCACCCATGCCCTCACTC-CTATCAATCATATATCAGCATTC 2634 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| | ||| ||| Sbjct 2633 GGAGTTTGTCTGGATTTG 2616 >seq3276 Length=5507 Score = 129 bits (142), Expect = 6e-28 Identities = 148/194 (76%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| ||||||||||| |||||||| | | | || Sbjct 2801 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTGGCTGTCTTAGGATTTAAAC 2742 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||||||| | ||||| | | |||| || | || |||| |||| || || || || Sbjct 2741 TTCGTTAGTTCAACTTAACATAGATTTGGGGACCTTAGCTGATAGTCTGGGTTATTTCCC 2682 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGA-CTGATGCGCATT 179 |||||| || |||||||| | |||| ||||||| || | || ||| | || ||||| Sbjct 2681 TCTCGGCCATGGACCTTAGCGCCCACAGCCTCACT-GC-CAGCTTGATATTAT-AGCATT 2625 Query 180 CGGAGTTTGGCAGG 193 ||||||||| |||| Sbjct 2624 CGGAGTTTGTCAGG 2611 >seq1246 Length=14010 Score = 125 bits (138), Expect = 8e-27 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| ||| | ||| Sbjct 12018 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCGCTGCAACCGGAC 11959 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||| | | ||||| | | || || | || |||| ||| || ||||| || Sbjct 11958 CTCGTTTGTTCAACTTAGTATATACTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 11899 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| ||||||||||||||||| | | | | | | |||||| Sbjct 11898 TCTCGGACATGGACCTTAGCACCCATGCCCTCACTC-CTGTGAAACATTTAACAGCATTC 11840 Query 181 GGAGTTTGGCAGGACTTGA 199 |||||||| | ||| |||| Sbjct 11839 GGAGTTTGTCTGGATTTGA 11821 >seq2128 Length=5974 Score = 111 bits (122), Expect = 2e-22 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| || || || Sbjct 2108 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGTGCATTCTCAC 2167 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||| | | ||||| | |||| || | || ||| ||| || || || || Sbjct 2168 ATCGTTTGTTCAACTTAGATAGTATTTGGGGACCTTAGCTGCTGGTCTGGGTTGTTTCCC 2227 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| | |||||||| ||||||| ||||||| || ||| | | ||| |||||| Sbjct 2228 TCTCGGCTATGGACCTTAGCACCCATAGCCTCACTGCCGGTGCA-GTGTAATG-GCATTC 2285 Query 181 GGAGTTTGGCAGG 193 |||||| | |||| Sbjct 2286 GGAGTTCGTCAGG 2298 >seq939 Length=11213 Score = 102 bits (112), Expect = 9e-20 Identities = 140/189 (74%), Gaps = 5/189 (3%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| |||| || ||||||||| || |||||||| |||||| || |||||| Sbjct 9134 GCACTCTTTAAATGATTG-CTGCTTCCAAGCAAACATCCTGGCTGTCTCGGCAGTCAGAC 9076 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||| || | | ||||| | |||| | | || ||| || || ||||| || Sbjct 9075 TTCCTTTGTTCAACTTAGTATAGATTTGGAGACCTTAGCTGTAGTTCTGGGTTCTTTCCC 9016 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGC-ATGACTGATGCGCATT 179 |||||| | ||||||||| ||||| ||||||||| || |||| || || || |||||| Sbjct 9015 TCTCGGACCCGGACCTTAGCACCCGAGCCCTCACT-GC-CGGCTATATCTTAT-CGCATT 8959 Query 180 CGGAGTTTG 188 ||||||||| Sbjct 8958 CGGAGTTTG 8950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537552940512