Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq112 143 2e-32
seq4801 111 1e-22
seq1887 84.2 2e-14
>seq112
Length=422422
Score = 143 bits (158), Expect = 2e-32
Identities = 106/124 (85%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| ||||||||||||||||| ||| | | |||||||||||||
Sbjct 161259 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCCGCCGTGGTAAGCGCCC 161318
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||| ||||| ||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct 161319 TCCTTGCGGTTAGGCTACCTACTTCTGGCGGAACCCGCTCCCATGGTGTGACGGGCGGTG 161378
Query 135 TGTA 138
||||
Sbjct 161379 TGTA 161382
>seq4801
Length=3019
Score = 111 bits (122), Expect = 1e-22
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| ||||||||||||||||| ||| | | |||| || ||||| ||
Sbjct 2748 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCTACCGTGGCAACCGCCCCCC 2689
Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137
||||| |||| || ||||| | | ||| ||||||||||||||||||||||||||
Sbjct 2688 TTGCGGTTAGGCTAGCTGCTTCTGGTAGAGCCCGCTCCCATGGTGTGACGGGCGGTGTGT 2629
Query 138 A 138
|
Sbjct 2628 A 2628
>seq1887
Length=9975
Score = 84.2 bits (92), Expect = 2e-14
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||| | | || | ||| | | ||
Sbjct 3304 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTTACCAGCCATACCTTGGCAGCCTGCC 3245
Query 75 TCCCGAAGGTTAAGCT-ACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGT 133
||| ||||| ||| | || ||||| | ||||| |||||| ||||||||||||||||
Sbjct 3244 TCCTTGCGGTTA-GCTCAACTGCTTCTGGTACAACCGACTCCCGTGGTGTGACGGGCGGT 3186
Query 134 GTGTA 138
|||||
Sbjct 3185 GTGTA 3181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345570723360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |