Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1210 251 1e-64
seq7200 199 6e-49
seq1296 172 8e-41
seq3241 150 3e-34
>seq1210
Length=14246
Score = 251 bits (278), Expect = 1e-64
Identities = 190/219 (87%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| || | ||||||| | ||| |||||||||||| |
Sbjct 7377 GTACAAAGGGCAGGGACGTAATCAATGCAAA-TTGATGATTTGCGTTTACTAGGAATT-C 7434
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA-TTTCAAAGATT 119
|||||| |||| || ||||||||| ||||||||| ||||||||| | ||| |||||||
Sbjct 7435 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCTATCACGATGCAGGTTTAAAAGATT 7494
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | ||| ||||||||||| | | |||||||||| |||||||||||||||||||||
Sbjct 7495 GCCCAGGCCTCTCGGCCAAGGTAAAA--CTCGTTGAATGCATCAGTGTAGCGCGCGTGCG 7552
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218
||||||||||||||||||||||||||||||||||| |||
Sbjct 7553 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATAGCC 7591
>seq7200
Length=70127
Score = 199 bits (220), Expect = 6e-49
Identities = 205/258 (79%), Gaps = 9/258 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||| ||||| |||||||| | ||||||||||||| |
Sbjct 4501 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACACTTACTAGGAATT-C 4444
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || ||||||||| ||||||| |||||| | | |||||| | ||
Sbjct 4443 CTCGTTCAAGGGAAATAATTGCAATTCCCTATCCCGATCACGGAGGATTTTCAAGGGGTT 4384
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||| ||||| | ||| | || | || ||| | | |||||||||||||||||
Sbjct 4383 ACCAATGCCTTTCGGCAATGGTTACAG-CACGCTGATTCCTCCAGTGTAGCGCGCGTGCA 4325
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238
|||| | |||||||||||||||||||||||||||||| ||||| || |||| | ||| |
Sbjct 4324 GCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 4268
Query 239 AGGC-CATCTCCCTCGAA 255
|| | | | |||||| ||
Sbjct 4267 AGCCGCTTGTCCCTCTAA 4250
Score = 161 bits (178), Expect = 1e-37
Identities = 174/224 (78%), Gaps = 5/224 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| || ||||| ||||||| |
Sbjct 14812 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTGCACTTACCAGGAATT-C 14755
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119
|||||| | | ||||||||||| | ||||| |||||| | || || ||
Sbjct 14754 CTCGTTCACGGGGAACAATTGCAAGCCCCGATCCCAGTCACGACGGTTATGATCCAGTTT 14695
Query 120 ACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| | |||| | |||||||||| | ||| |||||||| |||||
Sbjct 14694 GCCCAACCCTTTCGGGCCAGGTTTCCATACTCGTTGAAACCGTCATTGTAGCGCACGTGC 14635
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222
||||| | |||||||||||||||||||||||||||||| |||||
Sbjct 14634 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA 14592
>seq1296
Length=6398
Score = 172 bits (190), Expect = 8e-41
Identities = 180/231 (78%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| ||||||||| || ||||||| |||| ||||||| || |||||||| |||| |
Sbjct 4442 GTACAAACGGCAGGGACATAATCAACGCAAGCT-GATGACTTGCACTTACTAGAAATT-C 4499
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119
|||||| |||| | | |||| ||| || ||||||| | ||||| || ||| ||||||
Sbjct 4500 CTCGTTCAAGATCCAAAATTCCAAAGAACTATCCCTAACACGACTGGTATTAATAAGATT 4559
Query 120 ACCCGGACCTGTC--GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||||| |||| | || || | | | ||| ||| ||| |||| ||||||||
Sbjct 4560 ACCCGTACCTTCCCAGGACAGG---AAAAACTTTCTGAGCCAGTCATTGTAACGCGCGTG 4616
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| || || |||| ||||||||||||||||||||||||| ||||||||
Sbjct 4617 CGGCCGAGCACGTCTAGGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 4667
>seq3241
Length=4571
Score = 150 bits (166), Expect = 3e-34
Identities = 211/305 (69%), Gaps = 56/305 (18%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||| |||||| || ||||||||| ||| |
Sbjct 745 GTACAAAGGGCAGGGACGTAATCAGCGCAGGCT-GATGACCTGCACTTACTAGGGATT-C 802
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
|||||| |||||| |||| ||| | ||||||||||| ||||| || ||| |||||||
Sbjct 803 CTCGTTCAAGACCGCTAATTACAAAGGTCTATCCCCATTACGATAAACTTTGAAAAGATT 862
Query 120 ACCCGGACCTGTCGGCCAAGG--------------------------------------- 140
|||| |||| |||||| |||
Sbjct 863 ACCCAAACCTCTCGGCCCAGGCATACTTACTGGCTTTAGTAACAATATTTATTGTACCAA 922
Query 141 -----------TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189
| || ||||| ||| | ||||| |||||| ||||||||||||||||||
Sbjct 923 GTTTTACCAGCTTGTAAACTCGCTGAGTTCATCATTGTAGCACGCGTGCGGCCCAGAACA 982
Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCA--TCT 247
|| ||||||||||||||||||||||||||| | ||||||| | |||||| |||| | |
Sbjct 983 TCAAAGGGCATCACAGACCTGTTATTGCCTAATACTTCCGCTGGCTAAAA-GCCAGTTGT 1041
Query 248 CCCTC 252
|||||
Sbjct 1042 CCCTC 1046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751934172740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |