Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1210 268 4e-69 seq1296 248 4e-63 seq3132 174 7e-41 seq7200 161 4e-37 >seq1210 Length=14246 Score = 268 bits (296), Expect = 4e-69 Identities = 235/283 (83%), Gaps = 16/283 (6%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC- 466 ||||||||| |||||||||||||||||||||||| | ||||||| | | ||| ||||| Sbjct 6086 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATATGTGCGAGTATAGGAGTGACAAACT 6027 Query 467 -CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGA 525 || ||||| ||||||||||| | | ||| ||| || || || ||| ||| ||| Sbjct 6026 CCCATGCGC--AATGAAAGTGA-CAGTGGTTGGA-CCTTTGTGG---CACAATCCGCCGG 5974 Query 526 TCCTGATGTCTTCGG----ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGAT 581 ||| | |||||| |||| | ||||| ||||||| |||||||||||||||||| Sbjct 5973 -CCTCAATCCTTCGGGAGAATGG-TCTGAGTGTGAGCATACATGTTGGGACCCGAAAGAT 5916 Query 582 G-GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 5915 GTGTGAACTATGCCTGAATAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGA 5856 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5855 TTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 5813 Score = 233 bits (258), Expect = 8e-59 Identities = 225/283 (80%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 14089 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 14030 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||||||| | || || ||| ||| || || || ||| | |||||| ||||| || Sbjct 14029 AACCCGTAAGGCGCAAGGAAGCTGACTGGCGG---GATCCCCTCGAGGGTTGCACCGCCG 13973 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| | |||| | | || || || |||| ||||||| |||| ||||||||||||| Sbjct 13972 ACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGA 13913 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 13912 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 13853 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 13852 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 13810 Score = 113 bits (124), Expect = 2e-22 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 ||||||||||||| ||||||| |||| |||||||| |||| |||||| |||||||||| Sbjct 6346 GAGACCGATAGCGTACAAGTACCGTGAGGGAAAGATGCAAAGAACTTTGAAAAGAGAGTT 6287 Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||| || || |||||||| ||||||||||||| Sbjct 6286 AAAGAGTACCTGAAATTGCTGAAAGGGAAGCG 6255 Score = 95.1 bits (104), Expect = 5e-17 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 || || || |||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct 14231 GAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGC 14172 Query 600 AGGGTGAAGCCAGAGGAAAC 619 ||| ||||||||||||||| Sbjct 14171 GGGGCGAAGCCAGAGGAAAC 14152 >seq1296 Length=6398 Score = 248 bits (274), Expect = 4e-63 Identities = 227/281 (81%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAAC 466 ||||||||| |||||||||||||||||||| || || ||||||| | |||||| |||| Sbjct 3100 CCCGTCTTGAAACACGGACCAAGGAGTCTATCAATTAAGCGAGTGATAGGGTGTAGAAAC 3041 Query 467 CCGTGCGCGTAATGAAAGTGA--ACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCG 524 |||| ||| || |||||||| || ||||| || ||| ||| ||| |||| ||| Sbjct 3040 CCGTCCGCAAAACGAAAGTGAGTACA-AGGTGCCAAACCGCAAGGTAGCAGCATCACCCG 2982 Query 525 ATCCTGATGTCTTCGG--ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 | | || |||| || | || || ||| |||||| || |||| |||||||||||||| Sbjct 2981 ACCTAGA-GTCTCCGACAAAGGGTTCGAGGAAGAGCTTAATTGTTAGGACCCGAAAGATG 2923 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 |||||||| || |||||||||||||||||| ||||||||||||||| ||||| |||| | Sbjct 2922 GTGAACTACGCTTGAATAGGGTGAAGCCAGGGGAAACTCTGGTGGAAGCTCGTAGCGATA 2863 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| |||||||||||| || ||||||||| Sbjct 2862 CTGACGTGCAAATCGTTCGTCAAATTTGAGTGTAGGGGCGA 2822 Score = 161 bits (178), Expect = 4e-37 Identities = 136/166 (82%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||| | |||||| ||||||||||| |||||| |||| |||||| |||| |||||||||| Sbjct 3570 CTTCAAAGAGTCGGGTTGTTTGGGACTGCAGCCCTAAGTGGGAGATAAACTTCTTCTAAA 3511 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||| | ||||||||||||| ||||||| | || ||||||||||||| || Sbjct 3510 GCTAAATATACACGGGAGACCGATAGCGAACAAGTACTGCGAAGGAAAGATGAAAAGAAC 3451 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 |||| |||||| ||||||| || ||||| ||||| | |||||| Sbjct 3450 TTTGAAAAGAGGGTTAAAA--GACTTGAAACCGTTGAGAAGGAAGC 3407 >seq3132 Length=12859 Score = 174 bits (192), Expect = 7e-41 Identities = 116/129 (90%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||||| || || |||||||||||||||||||||||| || |||||| ||||||||| Sbjct 11648 GAGCATGCTTGATGCGACCCGAAAGATGGTGAACTATGCTTGCATAGGGCAAAGCCAGAG 11589 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||| Sbjct 11588 GAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATGTGAGTA 11529 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 11528 TAGGGGCGA 11520 Score = 138 bits (152), Expect = 5e-30 Identities = 135/173 (78%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | |||||| |||||||||| |||| | || | || |||| | | | ||||| | Sbjct 12350 TTCAAAGAGTCGGATTGTTTGGGATTGCAATCCAAAGTTGGTGGTATACTCCATCTAAGG 12291 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| || |||||||||||||| ||||||| |||| |||||||||||||||| Sbjct 12290 CTAAATATAAGCAAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACC 12231 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 || | |||||| | ||||| |||||||| || | |||||||| || ||| || Sbjct 12230 CTGAAGAGAGAG-TGAAAAGAACGTGAAACTGCTAAAAGGGAAACGTTTGAAA 12179 Score = 75.2 bits (82), Expect = 5e-11 Identities = 61/74 (82%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 ||||| ||||| | ||||||| ||| || ||||||||| ||||||||||||||||| | Sbjct 11851 CTAGGTTGCTGACAAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTGCA 11792 Query 438 ACATCTATGCGAGT 451 ||| |||||||| Sbjct 11791 ACACGCATGCGAGT 11778 >seq7200 Length=70127 Score = 161 bits (178), Expect = 4e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 7238 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAGGAAACTCTGGTG 7297 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| || |||| ||||| ||||||||||||||||| | |||||||||||||||| Sbjct 7298 GAGGTCCGAAGCGATTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCGA 7354 Score = 161 bits (178), Expect = 4e-37 Identities = 113/129 (88%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||| || ||||| |||||||||||||||||||||||| || ||| ||||||||||| Sbjct 17199 GAGCGTACATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGCAGGTTGAAGCCAGAG 17258 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||| ||||||| ||||| |||||||||||||||||| | |||||| Sbjct 17259 GAAACTCTGGTGGAGGACCGCAGCGATTCTGACGTGCAAATCGATCGTCAGAGCTGGGTA 17318 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 17319 TAGGGGCGA 17327 Score = 125 bits (138), Expect = 3e-26 Identities = 126/161 (78%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| || || ||||| | || |||| |||||| || ||||| ||||||| Sbjct 6424 GAGTCGGGTTGCCTGAGATCGCAGCCCAAAGTGGGTGGTAAACCTCATCTAAGGCTAAAT 6483 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||||| |||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 6484 AT-GGCCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 6542 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| | || | ||||||| Sbjct 6543 GAGAGAGTTCAAGAGGACGTGAAACCGCTGGGAAGGAAGCG 6583 Score = 120 bits (132), Expect = 1e-24 Identities = 113/143 (79%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| |||| ||| |||||| | | ||||| ||||||| Sbjct 16294 GAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 16353 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 16354 ACAACCACGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGTACTTTGAAG 16413 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||| |||| || ||||||| Sbjct 16414 AGAGAG-TAAACAGTGCGTGAAA 16435 Score = 75.2 bits (82), Expect = 5e-11 Identities = 71/90 (79%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 7002 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTTATTGGGTGGTAA 7061 Query 465 ACCCGTGC---GCGTAATGAAAGTGAACGG 491 |||| | || ||||||||||||||| Sbjct 7062 ACCCCAACAAAACGCAATGAAAGTGAACGG 7091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079806177800