Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq2368 107 2e-21 seq862 105 7e-21 >seq2368 Length=4479 Score = 107 bits (118), Expect = 2e-21 Identities = 131/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| ||||||||||||||| ||| |||| | ||||| || |||| | Sbjct 4388 CTGAAGCTTAGTGGCTTTTCTTGGAAGCTTGGTATCAGCAACTTCAGCACCTAAGTGC-- 4331 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACC 124 |||||||||| || | | || |||||||||| ||||||| | ||||| | Sbjct 4330 -CTCGTCATCACGTCTCAGAATTGACCTCCCGGATTTGCCTAAGAGATCTCCCTACACGC 4272 Query 125 TTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATT 182 |||||| ||| ||||| | ||| ||||| ||||||||||||| ||||||||| Sbjct 4271 TTAAACCAAGACGTCCAACACTTGGCTTGCCTAACCTTCTCCGTCCCCACATCGCATT 4214 >seq862 Length=13664 Score = 105 bits (116), Expect = 7e-21 Identities = 133/178 (75%), Gaps = 6/178 (3%) Strand=Plus/Plus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 |||||||||||| ||||||| |||||||| || |||| |||||||| | ||| | Sbjct 8703 CTGAAGCTTAGAGGCTTTTCCTGGAAGCAGGGTATCACTCACTTCGTGCCCGAAAGCA-- 8760 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCA-GCCTACCAC 123 |||||||||| | | || |||| |||||||| |||| || || |||||| Sbjct 8761 -CTCGTCATCACGCCTCAGC-TTAGCTGTCCGGATTTGCCTA-GACAGCACGCCTACACG 8817 Query 124 CTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCAT 181 ||||||| |||| ||||| || |||| ||| ||||||||||||| ||||||||| Sbjct 8818 CTTAAACCAGGACGTCCAACACCCGGCTGAGCTAACCTTCTCCGTCCCCCCATCGCAT 8875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518354621208