Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq1246 167 2e-39
seq939 165 8e-39
seq3276 163 3e-38
seq2128 150 2e-34
seq3771 143 3e-32
seq1887 109 5e-22
seq112 109 5e-22
seq866 104 2e-20
seq862 89.7 5e-16
seq2859 86.0 6e-15
>seq1246
Length=14010
Score = 167 bits (184), Expect = 2e-39
Identities = 143/175 (82%), Gaps = 10/175 (6%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
|||| |||||||| ||||||| ||||||||||||| ||||| ||||||||||||||| ||
Sbjct 10908 ACGGAGGATGCCTTGGCTCTCAGAGGCGAAGAAGGGCGTGACAAGCTGCGAAAAGCTGCG 10967
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAA-----CCCGATATA 120
|||||||||| ||||||||||||||| ||||| ||||||||||||| ||||| |
Sbjct 10968 GGGATTGGCAAATACGAATTGATCCGCAGATACCCGAATGGGGCAACCCATCCCGAGCAA 11027
Query 121 TTGGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCT 175
| || ||||| || ||| |||||||||||||||||||||||||||
Sbjct 11028 TCGG-GATATTCTATGCAAATAG----AAGGCGAACGTGGGGAACTGAAACATCT 11077
>seq939
Length=11213
Score = 165 bits (182), Expect = 8e-39
Identities = 146/179 (82%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
|||| ||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||
Sbjct 8030 ACGGGGGATGCCTAGGGTCTCAGAGGCGACGAAGGACGTGATAAGCTGCGATAAGCTACG 8089
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125
||||| ||||| ||||||||||||||| ||||||||||||||||| || ||| |
Sbjct 8090 GGGATGAGCACACCTCAATTGATCCGTAGATTTCCGAATGGGGCAACCCAATTAGTTGAA 8149
Query 126 GATATATCAT--AACGCTAG-GCGT-TAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
|| || || | ||| | | ||||||||||||||||||||||||||||| ||
Sbjct 8150 GACTAATTATTCATGTTTAGAACATGAAGGCGAACGTGGGGAACTGAAACATCTAATTA 8208
>seq3276
Length=5507
Score = 163 bits (180), Expect = 3e-38
Identities = 146/182 (80%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60
|||| ||||||||||||| ||| | ||||||| |||||||||| |||||||||||||
Sbjct 1694 GGCATACGGTGGATGCCTTGGCGTTGAGAGGCGATGAAGGACGTGGCAAGCTGCGAAAAG 1753
Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120
|| |||| | ||||||| || | | ||||| ||||||||||||||| ||||| |||||
Sbjct 1754 CTTCGGGTAGTGGCACACACACAATAATCCGAAGATATCCGAATGGGACAACCTGATATT 1813
Query 121 TTGGAGATATATCA--TAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178
||| ||| |||||| | ||| ||| | || ||| ||| |||||||||||||||||
Sbjct 1814 TTGAAGAAATATCACCCACCGCAAGGTGAGGAGCTAACCTGGAGAACTGAAACATCTAAG 1873
Query 179 TA 180
||
Sbjct 1874 TA 1875
>seq2128
Length=5974
Score = 150 bits (166), Expect = 2e-34
Identities = 140/176 (80%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||||||| ||| ||| |||||||||| |||||||||||||||||||||
Sbjct 3163 GGTGGATGCCTTGGCTCTCAGAGACGACGAAGGACGTGGTAAGCTGCGAAAAGCTACGGG 3104
Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127
|| | ||| | | ||||||||||||| ||||||||||||||||| || ||| |||
Sbjct 3103 GAGTTGCAAACGAGCGTTGATCCGTAGATGTCCGAATGGGGCAACCCTGCATGTTGAAGA 3044
Query 128 TAT---ATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
|| | | | ||| ||||| | | ||| || |||||||||||||||||||
Sbjct 3043 CATGCAACCCGACCGCAAGGCGGGA-GAAAACCCGGAGAACTGAAACATCTAAGTA 2989
>seq3771
Length=2568
Score = 143 bits (158), Expect = 3e-32
Identities = 97/109 (89%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
|||| |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2396 ACGGAGGATGCCTTGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGACAAGCTACG 2337
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||| ||| ||| |||||||||||||||||||||||||||||||
Sbjct 2336 GGGAGGTGCAAATAACCCTTGATCCGTAGATATCCGAATGGGGCAACCC 2288
>seq1887
Length=9975
Score = 109 bits (120), Expect = 5e-22
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60
||| ||||| |||||||| ||| || |||||||| |||||||| | ||||||||| |||
Sbjct 3807 GGCTGACGGCGGATGCCTTGGCACTAGGAGGCGATGAAGGACGCGGCAAGCTGCGATAAG 3866
Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115
|| |||||| || | | | |||||||| |||| ||||||||||||||||||
Sbjct 3867 CTTCGGGGAGCTGCTAACAGGCTTTGATCCGGAGATTTCCGAATGGGGCAACCCG 3921
>seq112
Length=422422
Score = 109 bits (120), Expect = 5e-22
Identities = 135/181 (75%), Gaps = 8/181 (4%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || |||||| |||||||||| | |||||||||||||||||
Sbjct 160591 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTGCAAGCCTGCGAAAAGCTACGGG 160532
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT----ATATT 122
|| ||||| | | ||||||||||||||||||||||||| ||||| | |
Sbjct 160531 GAGCTGGCAATGAAGCTTTGATCCGTAGATATCCGAATGGGGAAACCCACTCAGCAATGA 160472
Query 123 GGAGATATATCATAACGC-TAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179
| | | |||| || | |||| | |||||||| || ||||||||||||||||||
Sbjct 160471 GTATCTTTATCTGAATACATAGGATATTGAGGCGAACCCGGTGAACTGAAACATCTAAGT 160412
Query 180 A 180
|
Sbjct 160411 A 160411
>seq866
Length=17912
Score = 104 bits (114), Expect = 2e-20
Identities = 135/182 (74%), Gaps = 10/182 (5%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| ||||
Sbjct 14517 GGTGGATGCCTTGGCGATGATAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 14576
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA-TTGGA 125
|| ||||| ||| | |||||||| |||| ||||||||||| ||||| | || | |
Sbjct 14577 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC-ACCTAGCAGTA 14635
Query 126 GATATATCATAACG-----CTAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178
| ||| ||| | | ||| | | |||||||| || |||||||||||||| ||
Sbjct 14636 GGTATCGCATGATGAATACATAGTCATGCGAGGCGAACCGGGTGAACTGAAACATCTCAG 14695
Query 179 TA 180
||
Sbjct 14696 TA 14697
>seq862
Length=13664
Score = 89.7 bits (98), Expect = 5e-16
Identities = 89/114 (78%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| | ||||||||||| ||| || |||||| ||||||||| || ||||||||||
Sbjct 10263 GCATATGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTCGTAGCGTGCGAAAAGC 10204
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
| |||||| ||| | | | |||||||| |||||||||||||||| |||||
Sbjct 10203 TTCGGGGAGCCCGCAAACAGGCTTTGATCCGGAGATATCCGAATGGGGAAACCC 10150
>seq2859
Length=6146
Score = 86.0 bits (94), Expect = 6e-15
Identities = 88/114 (77%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| | ||||||||||| ||| | |||||| |||||||||| || ||||| ||||
Sbjct 3842 GCATATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGGTAGCCTGCGTAAAGT 3783
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
| |||||| ||||| | | | |||||||| | || ||||||||||| |||||
Sbjct 3782 TTCGGGGAGCTGGCAAACAAGCTTTGATCCGGAAATGTCCGAATGGGGAAACCC 3729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476758262716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |