Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1246 167 2e-39 seq939 165 8e-39 seq3276 163 3e-38 seq2128 150 2e-34 seq3771 143 3e-32 seq1887 109 5e-22 seq112 109 5e-22 seq866 104 2e-20 seq862 89.7 5e-16 seq2859 86.0 6e-15 >seq1246 Length=14010 Score = 167 bits (184), Expect = 2e-39 Identities = 143/175 (82%), Gaps = 10/175 (6%) Strand=Plus/Plus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||| |||||||| ||||||| ||||||||||||| ||||| ||||||||||||||| || Sbjct 10908 ACGGAGGATGCCTTGGCTCTCAGAGGCGAAGAAGGGCGTGACAAGCTGCGAAAAGCTGCG 10967 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAA-----CCCGATATA 120 |||||||||| ||||||||||||||| ||||| ||||||||||||| ||||| | Sbjct 10968 GGGATTGGCAAATACGAATTGATCCGCAGATACCCGAATGGGGCAACCCATCCCGAGCAA 11027 Query 121 TTGGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCT 175 | || ||||| || ||| ||||||||||||||||||||||||||| Sbjct 11028 TCGG-GATATTCTATGCAAATAG----AAGGCGAACGTGGGGAACTGAAACATCT 11077 >seq939 Length=11213 Score = 165 bits (182), Expect = 8e-39 Identities = 146/179 (82%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||| ||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||| Sbjct 8030 ACGGGGGATGCCTAGGGTCTCAGAGGCGACGAAGGACGTGATAAGCTGCGATAAGCTACG 8089 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125 ||||| ||||| ||||||||||||||| ||||||||||||||||| || ||| | Sbjct 8090 GGGATGAGCACACCTCAATTGATCCGTAGATTTCCGAATGGGGCAACCCAATTAGTTGAA 8149 Query 126 GATATATCAT--AACGCTAG-GCGT-TAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || || || | ||| | | ||||||||||||||||||||||||||||| || Sbjct 8150 GACTAATTATTCATGTTTAGAACATGAAGGCGAACGTGGGGAACTGAAACATCTAATTA 8208 >seq3276 Length=5507 Score = 163 bits (180), Expect = 3e-38 Identities = 146/182 (80%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| ||||||||||||| ||| | ||||||| |||||||||| ||||||||||||| Sbjct 1694 GGCATACGGTGGATGCCTTGGCGTTGAGAGGCGATGAAGGACGTGGCAAGCTGCGAAAAG 1753 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 || |||| | ||||||| || | | ||||| ||||||||||||||| ||||| ||||| Sbjct 1754 CTTCGGGTAGTGGCACACACACAATAATCCGAAGATATCCGAATGGGACAACCTGATATT 1813 Query 121 TTGGAGATATATCA--TAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 ||| ||| |||||| | ||| ||| | || ||| ||| ||||||||||||||||| Sbjct 1814 TTGAAGAAATATCACCCACCGCAAGGTGAGGAGCTAACCTGGAGAACTGAAACATCTAAG 1873 Query 179 TA 180 || Sbjct 1874 TA 1875 >seq2128 Length=5974 Score = 150 bits (166), Expect = 2e-34 Identities = 140/176 (80%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||||||| ||| ||| |||||||||| ||||||||||||||||||||| Sbjct 3163 GGTGGATGCCTTGGCTCTCAGAGACGACGAAGGACGTGGTAAGCTGCGAAAAGCTACGGG 3104 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127 || | ||| | | ||||||||||||| ||||||||||||||||| || ||| ||| Sbjct 3103 GAGTTGCAAACGAGCGTTGATCCGTAGATGTCCGAATGGGGCAACCCTGCATGTTGAAGA 3044 Query 128 TAT---ATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || | | | ||| ||||| | | ||| || ||||||||||||||||||| Sbjct 3043 CATGCAACCCGACCGCAAGGCGGGA-GAAAACCCGGAGAACTGAAACATCTAAGTA 2989 >seq3771 Length=2568 Score = 143 bits (158), Expect = 3e-32 Identities = 97/109 (89%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||| |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 2396 ACGGAGGATGCCTTGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGACAAGCTACG 2337 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 |||| ||| ||| ||||||||||||||||||||||||||||||| Sbjct 2336 GGGAGGTGCAAATAACCCTTGATCCGTAGATATCCGAATGGGGCAACCC 2288 >seq1887 Length=9975 Score = 109 bits (120), Expect = 5e-22 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 ||| ||||| |||||||| ||| || |||||||| |||||||| | ||||||||| ||| Sbjct 3807 GGCTGACGGCGGATGCCTTGGCACTAGGAGGCGATGAAGGACGCGGCAAGCTGCGATAAG 3866 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115 || |||||| || | | | |||||||| |||| |||||||||||||||||| Sbjct 3867 CTTCGGGGAGCTGCTAACAGGCTTTGATCCGGAGATTTCCGAATGGGGCAACCCG 3921 >seq112 Length=422422 Score = 109 bits (120), Expect = 5e-22 Identities = 135/181 (75%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||||| | ||||||||||||||||| Sbjct 160591 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTGCAAGCCTGCGAAAAGCTACGGG 160532 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT----ATATT 122 || ||||| | | ||||||||||||||||||||||||| ||||| | | Sbjct 160531 GAGCTGGCAATGAAGCTTTGATCCGTAGATATCCGAATGGGGAAACCCACTCAGCAATGA 160472 Query 123 GGAGATATATCATAACGC-TAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 | | | |||| || | |||| | |||||||| || |||||||||||||||||| Sbjct 160471 GTATCTTTATCTGAATACATAGGATATTGAGGCGAACCCGGTGAACTGAAACATCTAAGT 160412 Query 180 A 180 | Sbjct 160411 A 160411 >seq866 Length=17912 Score = 104 bits (114), Expect = 2e-20 Identities = 135/182 (74%), Gaps = 10/182 (5%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| |||| Sbjct 14517 GGTGGATGCCTTGGCGATGATAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 14576 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA-TTGGA 125 || ||||| ||| | |||||||| |||| ||||||||||| ||||| | || | | Sbjct 14577 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC-ACCTAGCAGTA 14635 Query 126 GATATATCATAACG-----CTAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 | ||| ||| | | ||| | | |||||||| || |||||||||||||| || Sbjct 14636 GGTATCGCATGATGAATACATAGTCATGCGAGGCGAACCGGGTGAACTGAAACATCTCAG 14695 Query 179 TA 180 || Sbjct 14696 TA 14697 >seq862 Length=13664 Score = 89.7 bits (98), Expect = 5e-16 Identities = 89/114 (78%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| | ||||||||||| ||| || |||||| ||||||||| || |||||||||| Sbjct 10263 GCATATGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTCGTAGCGTGCGAAAAGC 10204 Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| ||| | | | |||||||| |||||||||||||||| ||||| Sbjct 10203 TTCGGGGAGCCCGCAAACAGGCTTTGATCCGGAGATATCCGAATGGGGAAACCC 10150 >seq2859 Length=6146 Score = 86.0 bits (94), Expect = 6e-15 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| | ||||||||||| ||| | |||||| |||||||||| || ||||| |||| Sbjct 3842 GCATATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGGTAGCCTGCGTAAAGT 3783 Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| ||||| | | | |||||||| | || ||||||||||| ||||| Sbjct 3782 TTCGGGGAGCTGGCAAACAAGCTTTGATCCGGAAATGTCCGAATGGGGAAACCC 3729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476758262716