Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq2044 197 2e-48 seq2180 170 3e-40 seq862 167 3e-39 seq2128 154 2e-35 seq8258 150 2e-34 seq1246 147 3e-33 seq4354 143 4e-32 seq2001 140 5e-31 seq939 132 7e-29 seq5381 123 3e-26 seq6036 116 5e-24 seq2368 80.6 4e-13 >seq2044 Length=12966 Score = 197 bits (218), Expect = 2e-48 Identities = 198/253 (78%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| |||||||||||||||||||||||||||||| |||| || |||||||| Sbjct 9126 TTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTA-CGACTTCGCACA 9068 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT--- 118 ||||| |||||||||||||||||||| || | | ||||||| | | ||| Sbjct 9067 GACCTATGTTTTTAGTAAACAGTCGCCACCGCCATTGCTCTGCGGCTCCTTTATGCTTAT 9008 Query 119 -CAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | | ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct 9007 GCAGTAAATGCTTCACAAAAAGGAGCACCCCTTCTCCCGAAGTTACGGGGTTATTTTGCC 8948 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGT--ATTCTCTACCTGACCACCTGTG 235 || ||||||||||| ||||| | ||| |||||| || ||| | ||| ||||||||| Sbjct 8947 GAGTTCCTTAACCAGAGTTCTCTCGAGCGCCTTGGTGCATT-TACACCCACCCACCTGTG 8889 Query 236 TCGGTTTACGGTA 248 | ||||| ||||| Sbjct 8888 TTGGTTTTCGGTA 8876 >seq2180 Length=5695 Score = 170 bits (188), Expect = 3e-40 Identities = 189/249 (76%), Gaps = 25/249 (10%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || |||||||| ||| | || || ||| Sbjct 5662 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACATCACCTTTCGGT-TTAGCAG 5604 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| ||||||||||| | || ||| ||||| || ||| Sbjct 5603 AGACCTGTGTTTTTGTTAAACAGTCGCCTGGGCCTTTTCACTGCGGCCT------GCT-- 5552 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | |||| |||||||||||||||||||||||||| |||||||||| Sbjct 5551 --------TGC----GCAG--GCACCCCTTCTCCCGAAGTTACGGGGTTATTTTGCCGAG 5506 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACC-ACCTGTGTCGG 239 ||||||||| | ||||| | || | |||||| ||||||| ||| ||| ||||||||||| Sbjct 5505 TTCCTTAACAATAGTTCTCTCGCTCACCTTAGGATTCTCT-CCTTACCTACCTGTGTCGG 5447 Query 240 TTTACGGTA 248 ||||||||| Sbjct 5446 TTTACGGTA 5438 >seq862 Length=13664 Score = 167 bits (184), Expect = 3e-39 Identities = 192/255 (75%), Gaps = 9/255 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| |||||||||||||||| || ||||| ||| ||| | | ||| ||| Sbjct 8437 CTTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCGGCTTTC-GCCTTTGCAG 8495 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| || | |||||||||| || | | |||| Sbjct 8496 AGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTCTCTGCGGCCTCATCACGCTCC 8555 Query 121 ACACGTCG------TTCAC-CAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTT 173 || || || ||||| | | | |||| ||||||||||||||||||| || || Sbjct 8556 ACCCG-CGAGGGGCTTCACGCTACCGAGGCATACCTTCTCCCGAAGTTACGGTATCAATT 8614 Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233 |||||| |||||| || ||||| | | | |||||||| ||| || |||| ||||||| Sbjct 8615 TGCCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATTTTCATCCTGCCCACCTG 8674 Query 234 TGTCGGTTTACGGTA 248 ||||||||| ||||| Sbjct 8675 TGTCGGTTTGCGGTA 8689 >seq2128 Length=5974 Score = 154 bits (170), Expect = 2e-35 Identities = 182/248 (73%), Gaps = 19/248 (8%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || ||||| || ||||| | || ||| Sbjct 1371 CTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACTTCATCTTACGATTTT-GCAG 1429 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || ||| ||||| | ||| | Sbjct 1430 AGTCCTGTGTTTTTGCTAAACAGTCGCCTGGGCCTTTTCACTGCGGCT----CCATTTTT 1485 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 ||||| | | || ||||||||||||||||| |||||||||||| || Sbjct 1486 ACACGGAG--------------CGCCTCTTCTCCCGAAGTTACGAGGCCATTTTGCCTAA 1531 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| ||||| ||| |||||||| || |||| | ||| |||||||||||| Sbjct 1532 TTCCTTAGCCATGATTCACTCGAGCGCCTTAGGATACTCTCCTCGACTACCTGTGTCGGT 1591 Query 241 TTACGGTA 248 |||||||| Sbjct 1592 TTACGGTA 1599 >seq8258 Length=2548 Score = 150 bits (166), Expect = 2e-34 Identities = 184/248 (74%), Gaps = 11/248 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| || ||| | | || ||| Sbjct 1494 CTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCTCTTGC-GAGTTTGCAG 1436 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| || ||||||| ||| ||| | || | Sbjct 1435 AGTCCTGTGTTTTTAATAAACAGTCGCTACCACCTATTCTGTGCCCCCA-----ATCTAA 1381 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | | |||| | ||| || ||| ||||||||||||| | || |||||||| Sbjct 1380 AGTTGCC-TTCAA----ATTGGGACTTCTTATCCCGAAGTTACGAAGTCAATTTGCCGAG 1326 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | || ||| | | | ||||||||||| |||||| | | |||||||||||| Sbjct 1325 TTCCTTCAGCATCATTCTCTCAAGCGCCTTAGTATATTCTACCCGTCTACCTGTGTCGGT 1266 Query 241 TTACGGTA 248 || ||||| Sbjct 1265 TTGCGGTA 1258 >seq1246 Length=14010 Score = 147 bits (162), Expect = 3e-33 Identities = 181/248 (73%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||| ||||| || ||||| || ||| | | || ||| Sbjct 12685 CTTAACCTTCCGGCACCGGGCAGGTGTCAGGCCATATACGTCATCTTGCGAT-TTAGCAT 12627 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | | ||||||||| || | || || Sbjct 12626 AGCCCTGTGTTTTTGATAAACAGTCGCCTGGGCCATTTCTCTGCGTCC-CGACTTGC--- 12571 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 |||| || ||||||||||||||||||||||| |||||||| | Sbjct 12570 ----GTCG------------GGATCCCCTTCTCCCGAAGTTACGGGGTGATTTTGCCTAG 12527 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| |||| ||||| ||| ||||| || ||||||| | |||| |||||||||||| Sbjct 12526 TTCCTTAGCCACGATTCACTCGAGCGCCTCAGGATTCTCTCCTTGACTACCTGTGTCGGT 12467 Query 241 TTACGGTA 248 || ||||| Sbjct 12466 TTGCGGTA 12459 >seq4354 Length=3557 Score = 143 bits (158), Expect = 4e-32 Identities = 181/249 (73%), Gaps = 25/249 (10%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||| ||||| || |||||||| ||||| | || ||| Sbjct 3523 CTTAACCTTCCGGCACCGGGCAGGTGTCAGGCCTTATACATCATCTTACGAT-TTAGCAA 3465 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || || ||||| || Sbjct 3464 AGCCCTGTGTTTTTGTTAAACAGTCGCCTGGACCTTTTTACTGCGTCC------------ 3417 Query 121 ACACGTCGTTCACCAGCAGTGGCA-CCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 ||| | || |||| | |||||||||||||||||||||||| |||||||| | Sbjct 3416 -CACTT-----AC-----GTGGGAGCCCCTTCTCCCGAAGTTACGGGGCGATTTTGCCTA 3368 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 ||||||| ||| ||||| ||| ||||| || ||||||| | |||| ||||||||||| Sbjct 3367 GTTCCTTAGCCATGATTCACTCGAGCGCCTCAGGATTCTCTCCTTGACTACCTGTGTCGG 3308 Query 240 TTTACGGTA 248 ||| |||| Sbjct 3307 TTTGTGGTA 3299 >seq2001 Length=3286380 Score = 140 bits (154), Expect = 5e-31 Identities = 187/253 (74%), Gaps = 9/253 (4%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || |||| ||| |||||| Sbjct 2269075 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCCACTT-GCGTGTTCGCAGA 2269017 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCT--TCCCTCTATTCTCTGCGACCACCACCAGCTC 119 | ||||||||||| ||||||||||||| || || || | ||| ||||| ||||| Sbjct 2269016 GTCCTGTGTTTTTGGTAAACAGTCGCTAGAGCCACT-TTAT-TGCAACCACGTTCAGCTT 2268959 Query 120 AACACGT---CGTTCACC-AGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 | || ||||| | |||||||||||||||||||||||||||||| | ||| Sbjct 2268958 CCCTTGTACAGAGTCACCTACGCGTGGCACCCCTTCTCCCGAAGTTACGGGGCTAAATTG 2268899 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTG 235 | | ||||||| | |||| | | | |||| |||| |||||| | ||||||| Sbjct 2268898 CAAAGTTCCTTAGGAAGTGTTCTCTCACGCCCCTTGGTATATTCTACCCACCTACCTGTG 2268839 Query 236 TCGGTTTACGGTA 248 |||| || ||||| Sbjct 2268838 TCGGATTGCGGTA 2268826 >seq939 Length=11213 Score = 132 bits (146), Expect = 7e-29 Identities = 178/249 (71%), Gaps = 23/249 (9%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGAC-TTACCGTCTTCGCA 59 |||| ||||||| ||||||||||| ||||| || ||||| ||||| ||| |||||||| Sbjct 9812 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCATATACGTCGACATTA--ATCTTCGCA 9755 Query 60 CGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC 119 | | ||||||||| ||||||||||| | | ||||||||||||| || |||| Sbjct 9754 TAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCATTTCTCTGCGACCA-CAATTGCTC 9696 Query 120 AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 |||| ||| || |||||||||||| ||| | |||||| | Sbjct 9695 -------------------GTGGTTCCCTTTATCCCGAAGTTACAGGGTTAATTTGCCTA 9655 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 ||||||| || ||||| ||| | |||||| ||||| | ||| ||||||||||| Sbjct 9654 GTTCCTTAGCCGTGATTCACTCGAGCACCTTAGGCTTCTCGCCTCGACTACCTGTGTCGG 9595 Query 240 TTTACGGTA 248 ||||||||| Sbjct 9594 TTTACGGTA 9586 >seq5381 Length=4748 Score = 123 bits (136), Expect = 3e-26 Identities = 176/248 (71%), Gaps = 20/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || ||||| || ||| | || ||| Sbjct 3550 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTAAATTTT-GCAA 3492 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | | ||||||||| ||||||||||| | | ||||||||| || | Sbjct 3491 AGCCATGTGTTTTTGTTAAACAGTCGCCTGGACCATTTCTCTGCGCCCTC---------- 3442 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || |||| || || | |||||||||||||||||||||||| | |||||| | Sbjct 3441 -----TC--TCACGAGTAGGG--ACCCCTTCTCCCGAAGTTACGGGGTTAATTTGCCTAG 3391 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| |||| ||| | ||| | ||||||| | ||| |||||||||||| Sbjct 3390 TTCCTTAGCCATGAATCACTCGAGCACCTGTGGATTCTCTCCTCGACTACCTGTGTCGGT 3331 Query 241 TTACGGTA 248 || ||||| Sbjct 3330 TTGCGGTA 3323 >seq6036 Length=8020 Score = 116 bits (128), Expect = 5e-24 Identities = 168/240 (70%), Gaps = 23/240 (10%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 3430 TTAACCTTCTGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGA 3488 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 ||||||||||||| ||||||||| |||| ||| | ||| ||| | || Sbjct 3489 GACCTGTGTTTTTGGTAAACAGTTGCTTGGATCTTGTTATTGCAACCTTA------TAAA 3542 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 | | |||| ||||||||||||||||||| | ||||||||||| | Sbjct 3543 TAAG----------------GCACTCCTTCTCCCGAAGTTACGGAGTCATTTTGCCGAGT 3586 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 |||||| | |||| | || | ||||||||| |||||||| ||||||||||||||| Sbjct 3587 TCCTTAGAGAGAGTTATCTCGCGCCCCTTAGTATACTCTACCTACCCACCTGTGTCGGTT 3646 >seq2368 Length=4479 Score = 80.6 bits (88), Expect = 4e-13 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 172 TTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACC 231 |||||||| |||||| ||| ||||| | | | |||||||| |||||| |||| ||||| Sbjct 4479 TTTGCCGAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGAATTCTCATCCTGCCCACC 4420 Query 232 TGTGTCGGTTTACGGTA 248 ||||||||||| ||||| Sbjct 4419 TGTGTCGGTTTGCGGTA 4403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694339214828