Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq5381 165 9e-39
seq939 161 1e-37
seq1246 147 2e-33
seq4354 145 8e-33
seq2128 136 4e-30
seq8258 123 3e-26
seq2180 113 5e-23
seq862 84.2 2e-14
seq2044 75.2 1e-11
>seq5381
Length=4748
Score = 165 bits (182), Expect = 9e-39
Identities = 142/175 (81%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| ||||||| | || || | ||| ||| |||||| ||| || ||
Sbjct 3326 CGCAAACCGACACAGGTAGTCGAGGAGAGAATCCACAGGTGCTCGAGTGATTCATGGCTA 3385
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
|||||||||||||| | |||| |||||||||||| || |||||||||| | | | ||
Sbjct 3386 AGGAACTAGGCAAATTAACCCCGTAACTTCGGGAGAAGGGGTCCCTACTCGTGA--GAGA 3443
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|||||||||||| ||||||||| ||||||||||||||||||| |||| ||| ||
Sbjct 3444 GGGCGCAGAGAAATGGTCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCAAA 3498
>seq939
Length=11213
Score = 161 bits (178), Expect = 1e-37
Identities = 142/175 (81%), Gaps = 3/175 (2%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || | |||||| ||| ||||||||||||| ||
Sbjct 9589 CGTAAACCGACACAGGTAGTCGAGGCGAGAAGCCTAAGGTGCTCGAGTGAATCACGGCTA 9648
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
|||||||||||||| | |||||||||||||||||||||||| || | || ||| |
Sbjct 9649 AGGAACTAGGCAAATTAACCCTGTAACTTCGGGATAAAGGGAACC--ACGAGCAAT-TGT 9705
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| || |||||| ||||||||||||||||||| |||| ||| ||
Sbjct 9706 GGTCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTATGCGAA 9760
>seq1246
Length=14010
Score = 147 bits (162), Expect = 2e-33
Identities = 140/176 (80%), Gaps = 5/176 (3%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| |||||| | || || || ||||||| ||||||||| || ||
Sbjct 12462 CGCAAACCGACACAGGTAGTCAAGGAGAGAATCCTGAGGCGCTCGAGTGAATCGTGGCTA 12521
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG-TCCCTACCCAGAAATGGG 140
|||||||||||||| | |||| |||||||||||| || ||| |||| || | || | |
Sbjct 12522 AGGAACTAGGCAAAATCACCCCGTAACTTCGGGAGAAGGGGATCCCGACGC--AAGTCG- 12578
Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| || |||||| |||||||| ||||||||||||||| ||| ||
Sbjct 12579 -GGACGCAGAGAAATGGCCCAGGCGACTGTTTATCAAAAACACAGGGCTATGCTAA 12633
>seq4354
Length=3557
Score = 145 bits (160), Expect = 8e-33
Identities = 137/173 (79%), Gaps = 5/173 (3%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| |||||| | || || || ||||||| |||||||||| || ||||
Sbjct 3304 CAAACCGACACAGGTAGTCAAGGAGAGAATCCTGAGGCGCTCGAGTGAATCATGGCTAAG 3363
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143
|||||||||||| | ||| |||||||||||| || ||| || | | || |||||
Sbjct 3364 GAACTAGGCAAAATCGCCCCGTAACTTCGGGAGAAGGGGCTCC--CACGTAAGTGGGA-- 3419
Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
||||| || |||||||||| |||||||||||||||||||||||| ||| ||
Sbjct 3420 -CGCAGTAAAAAGGTCCAGGCGACTGTTTAACAAAAACACAGGGCTTTGCTAA 3471
>seq2128
Length=5974
Score = 136 bits (150), Expect = 4e-30
Identities = 137/176 (78%), Gaps = 3/176 (2%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || ||| |||||||||| |||||||||| || ||
Sbjct 1596 CGTAAACCGACACAGGTAGTCGAGGAGAGTATCCTAAGGCGCTCGAGTGAATCATGGCTA 1537
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCCTACCCAGAAATGGG 140
||||| |||||||| || || |||||||||||| || ||| | | | ||||||
Sbjct 1536 AGGAATTAGGCAAAATGGCCTCGTAACTTCGGGAGAAGAGGCGCTCCGTGTAAAAATGG- 1478
Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| ||||| ||| ||| |||||| |||||||| |||||||||||| || ||| ||
Sbjct 1477 -AGCCGCAGTGAAAAGGCCCAGGCGACTGTTTAGCAAAAACACAGGACTCTGCAAA 1423
>seq8258
Length=2548
Score = 123 bits (136), Expect = 3e-26
Identities = 138/182 (76%), Gaps = 7/182 (4%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| |||| ||||| ||||||||||||||||||||| |||| | | | |
Sbjct 1261 CGCAAACCGACACAGGTAGACGGGTAGAATATACTAAGGCGCTTGAGAGAATGATGCTGA 1320
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC--TACCCAG--AAAT 137
||||||| |||||| |||| ||||||||||||||| ||||| | || || |
Sbjct 1321 AGGAACTCGGCAAATTGACTTCGTAACTTCGGGATAAGAAGTCCCAATTTGAAGGCAACT 1380
Query 138 ---GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCC 194
| ||| ||| ||||||||| || |||||||| ||||||||||| || |||
Sbjct 1381 TTAGATTGGGGGCACAGAATAGGTGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCA 1440
Query 195 AA 196
||
Sbjct 1441 AA 1442
>seq2180
Length=5695
Score = 113 bits (124), Expect = 5e-23
Identities = 130/175 (74%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| |||| | || || |||||| | ||| ||| | ||||
Sbjct 5441 CGTAAACCGACACAGGTAGGTAAGGAGAGAATCCTAAGGTGAGCGAGAGAACTATTGTTA 5500
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| | |||| |||||||||||| || |||| ||| | || | |
Sbjct 5501 AGGAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGTGCCTGCGCA-----AGCA 5555
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| ||| |||||| ||||||||||||||||||||| || ||| ||
Sbjct 5556 GGCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACAGGTCTCTGCTAA 5610
>seq862
Length=13664
Score = 84.2 bits (92), Expect = 2e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80
||||||| |||||| || | | || |||| || |||||||||||||| ||| ||| ||
Sbjct 8686 CGCAAACCGACACAGGTGGGCAGGATGAAAATTCTAAGGCGCTTGAGAGAACTCA-GGAG 8628
Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||| |||||| ||| | |||||||||||| ||
Sbjct 8627 AAGGAACTCGGCAAATTGATACCGTAACTTCGGGAGAA 8590
>seq2044
Length=12966
Score = 75.2 bits (82), Expect = 1e-11
Identities = 79/103 (77%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGT-TGAATATACTAAGGCGCTTGAGTGAATCACGGTT 80
|| |||| ||||| || | |||| | ||| || |||||||| ||| ||| ||||
Sbjct 8879 CGAAAACCAACACAGGTGGGTGGGTGTAAATGCACCAAGGCGCTCGAGAGAACTCTGGTT 8938
Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
|||||||| |||||| | |||| |||||||||||| || ||||
Sbjct 8939 AAGGAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGT 8981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531153500744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |