Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq5381 165 9e-39 seq939 161 1e-37 seq1246 147 2e-33 seq4354 145 8e-33 seq2128 136 4e-30 seq8258 123 3e-26 seq2180 113 5e-23 seq862 84.2 2e-14 seq2044 75.2 1e-11 >seq5381 Length=4748 Score = 165 bits (182), Expect = 9e-39 Identities = 142/175 (81%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| ||||||| | || || | ||| ||| |||||| ||| || || Sbjct 3326 CGCAAACCGACACAGGTAGTCGAGGAGAGAATCCACAGGTGCTCGAGTGATTCATGGCTA 3385 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 |||||||||||||| | |||| |||||||||||| || |||||||||| | | | || Sbjct 3386 AGGAACTAGGCAAATTAACCCCGTAACTTCGGGAGAAGGGGTCCCTACTCGTGA--GAGA 3443 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 |||||||||||| ||||||||| ||||||||||||||||||| |||| ||| || Sbjct 3444 GGGCGCAGAGAAATGGTCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCAAA 3498 >seq939 Length=11213 Score = 161 bits (178), Expect = 1e-37 Identities = 142/175 (81%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||||| | || | |||||| ||| ||||||||||||| || Sbjct 9589 CGTAAACCGACACAGGTAGTCGAGGCGAGAAGCCTAAGGTGCTCGAGTGAATCACGGCTA 9648 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 |||||||||||||| | |||||||||||||||||||||||| || | || ||| | Sbjct 9649 AGGAACTAGGCAAATTAACCCTGTAACTTCGGGATAAAGGGAACC--ACGAGCAAT-TGT 9705 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||||||| || |||||| ||||||||||||||||||| |||| ||| || Sbjct 9706 GGTCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTATGCGAA 9760 >seq1246 Length=14010 Score = 147 bits (162), Expect = 2e-33 Identities = 140/176 (80%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| |||||| | || || || ||||||| ||||||||| || || Sbjct 12462 CGCAAACCGACACAGGTAGTCAAGGAGAGAATCCTGAGGCGCTCGAGTGAATCGTGGCTA 12521 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG-TCCCTACCCAGAAATGGG 140 |||||||||||||| | |||| |||||||||||| || ||| |||| || | || | | Sbjct 12522 AGGAACTAGGCAAAATCACCCCGTAACTTCGGGAGAAGGGGATCCCGACGC--AAGTCG- 12578 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||||||| || |||||| |||||||| ||||||||||||||| ||| || Sbjct 12579 -GGACGCAGAGAAATGGCCCAGGCGACTGTTTATCAAAAACACAGGGCTATGCTAA 12633 >seq4354 Length=3557 Score = 145 bits (160), Expect = 8e-33 Identities = 137/173 (79%), Gaps = 5/173 (3%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| |||||| | || || || ||||||| |||||||||| || |||| Sbjct 3304 CAAACCGACACAGGTAGTCAAGGAGAGAATCCTGAGGCGCTCGAGTGAATCATGGCTAAG 3363 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 |||||||||||| | ||| |||||||||||| || ||| || | | || ||||| Sbjct 3364 GAACTAGGCAAAATCGCCCCGTAACTTCGGGAGAAGGGGCTCC--CACGTAAGTGGGA-- 3419 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| || |||||||||| |||||||||||||||||||||||| ||| || Sbjct 3420 -CGCAGTAAAAAGGTCCAGGCGACTGTTTAACAAAAACACAGGGCTTTGCTAA 3471 >seq2128 Length=5974 Score = 136 bits (150), Expect = 4e-30 Identities = 137/176 (78%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||||| | || ||| |||||||||| |||||||||| || || Sbjct 1596 CGTAAACCGACACAGGTAGTCGAGGAGAGTATCCTAAGGCGCTCGAGTGAATCATGGCTA 1537 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCCTACCCAGAAATGGG 140 ||||| |||||||| || || |||||||||||| || ||| | | | |||||| Sbjct 1536 AGGAATTAGGCAAAATGGCCTCGTAACTTCGGGAGAAGAGGCGCTCCGTGTAAAAATGG- 1478 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||| ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 1477 -AGCCGCAGTGAAAAGGCCCAGGCGACTGTTTAGCAAAAACACAGGACTCTGCAAA 1423 >seq8258 Length=2548 Score = 123 bits (136), Expect = 3e-26 Identities = 138/182 (76%), Gaps = 7/182 (4%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| |||| ||||| ||||||||||||||||||||| |||| | | | | Sbjct 1261 CGCAAACCGACACAGGTAGACGGGTAGAATATACTAAGGCGCTTGAGAGAATGATGCTGA 1320 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC--TACCCAG--AAAT 137 ||||||| |||||| |||| ||||||||||||||| ||||| | || || | Sbjct 1321 AGGAACTCGGCAAATTGACTTCGTAACTTCGGGATAAGAAGTCCCAATTTGAAGGCAACT 1380 Query 138 ---GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCC 194 | ||| ||| ||||||||| || |||||||| ||||||||||| || ||| Sbjct 1381 TTAGATTGGGGGCACAGAATAGGTGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCA 1440 Query 195 AA 196 || Sbjct 1441 AA 1442 >seq2180 Length=5695 Score = 113 bits (124), Expect = 5e-23 Identities = 130/175 (74%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| |||| | || || |||||| | ||| ||| | |||| Sbjct 5441 CGTAAACCGACACAGGTAGGTAAGGAGAGAATCCTAAGGTGAGCGAGAGAACTATTGTTA 5500 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| |||||| | |||| |||||||||||| || |||| ||| | || | | Sbjct 5501 AGGAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGTGCCTGCGCA-----AGCA 5555 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||| ||| |||||| ||||||||||||||||||||| || ||| || Sbjct 5556 GGCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACAGGTCTCTGCTAA 5610 >seq862 Length=13664 Score = 84.2 bits (92), Expect = 2e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| || | | || |||| || |||||||||||||| ||| ||| || Sbjct 8686 CGCAAACCGACACAGGTGGGCAGGATGAAAATTCTAAGGCGCTTGAGAGAACTCA-GGAG 8628 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||| |||||| ||| | |||||||||||| || Sbjct 8627 AAGGAACTCGGCAAATTGATACCGTAACTTCGGGAGAA 8590 >seq2044 Length=12966 Score = 75.2 bits (82), Expect = 1e-11 Identities = 79/103 (77%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGT-TGAATATACTAAGGCGCTTGAGTGAATCACGGTT 80 || |||| ||||| || | |||| | ||| || |||||||| ||| ||| |||| Sbjct 8879 CGAAAACCAACACAGGTGGGTGGGTGTAAATGCACCAAGGCGCTCGAGAGAACTCTGGTT 8938 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 |||||||| |||||| | |||| |||||||||||| || |||| Sbjct 8939 AAGGAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGT 8981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531153500744