Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3132 376 4e-102 seq7200 361 9e-98 seq1210 338 1e-90 seq1296 333 5e-89 seq1924 91.5 3e-16 seq2044 80.6 5e-13 seq6036 73.4 7e-11 seq2128 73.4 7e-11 >seq3132 Length=12859 Score = 376 bits (416), Expect = 4e-102 Identities = 244/265 (92%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 379 TCATCAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 438 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| Sbjct 439 TTAGTGGGTGAACAATCCAACACTTATAGAATTCTGCTTCTATATGATAGGAAGAGCCGA 498 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGA-ACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 499 CATCGAAGGATCAAAAAGCAACGTCGCTATGAGTCGCTTGGCTGCCACAAGCCAGTTATC 558 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAA-ATTTCGAGGGACTAAAGGATCGATA 268 |||||||||||||||||| |||||| | || || | | | || ||| ||||||||||| Sbjct 559 CCTGTGGTAACTTTTCTGACACCTCCATGCTGAATACTCCCAGCAACTGAAGGATCGATA 618 Query 269 GGCCACACTTTCATGGTTTGTATTC 293 ||||||||||||||||||||||||| Sbjct 619 GGCCACACTTTCATGGTTTGTATTC 643 >seq7200 Length=70127 Score = 361 bits (400), Expect = 9e-98 Identities = 245/271 (90%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 25 CGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 9556 CGACTGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 9497 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 9496 TTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAA 9437 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 9436 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCA 9377 Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCA-AATTTCGAGGGACTAAAGGA 262 |||||||||||||||||||||||| ||||||| || | | ||| | | |||||| Sbjct 9376 GTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTAGAGACCTTCTA-ATTCAAAAGGA 9318 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||| ||||| ||| ||||||| Sbjct 9317 TCGATAGGCCACGCTTTCGCGGTCTGTATTC 9287 Score = 329 bits (364), Expect = 6e-88 Identities = 234/269 (87%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 19693 TCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 19634 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| ||||||||| || | | |||| |||||||| Sbjct 19633 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCGTCACAACGCTAGGGAGAGCCGA 19574 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 19573 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 19514 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG------AGGGACTAAAGGATC 264 ||||||||||||||||| ||||||| || ||||| | | | | |||||||| Sbjct 19513 CTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCGGAATATCAAAATCAAAAGGATC 19454 Query 265 GATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| | |||||| ||| ||||||| Sbjct 19453 GATAGGCCGCGCTTTCACGGTCTGTATTC 19425 Score = 91.5 bits (100), Expect = 3e-16 Identities = 55/57 (96%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 25 CGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTC 80 |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 49431 CGACTGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTC 49375 >seq1210 Length=14246 Score = 338 bits (374), Expect = 1e-90 Identities = 235/264 (89%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 3762 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTG 3821 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||| || ||| || |||||| | ||||||||||||||||| Sbjct 3822 TTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGCCGA 3881 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3882 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 3941 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAGGATCGATAG 269 ||||||||||||||||| ||||||| | ||||| ||| | ||| ||||||||||||| Sbjct 3942 CTGTGGTAACTTTTCTGACACCTCTCACTTCAAA-TTCCAAAAACTGAAAGGATCGATAG 4000 Query 270 GCCACACTTTCATGGTTTGTATTC 293 ||||| |||| ||||||||||| Sbjct 4001 GCCACGGTTTCCCGGTTTGTATTC 4024 >seq1296 Length=6398 Score = 333 bits (368), Expect = 5e-89 Identities = 221/244 (91%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 376 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 435 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || | | |||||||||||| ||||||||||||||||| Sbjct 436 TTAGCGGGTGAACAATCCGACACGTTGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 495 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 496 CATCGAAGGATCAAAAAGCAACGTCGATATGAACTCTTGGCTGCCACAAGCCAGTTATCC 555 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||| || | | ||||||||||||||| Sbjct 556 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAACTTGTAAAG-TTAAAGGATCGATAGG 614 Query 271 CCAC 274 |||| Sbjct 615 CCAC 618 Score = 134 bits (148), Expect = 2e-29 Identities = 99/114 (87%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 925 TGAACTCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCT 984 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| || | | ||||||||||||||||||| |||| ||||||||||| Sbjct 985 TAAAACTTGTAAAG-TTAAAGGATCGATAGGCCACGGTTTCCCGGTTTGTATTC 1037 >seq1924 Length=238468 Score = 91.5 bits (100), Expect = 3e-16 Identities = 55/57 (96%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 25 CGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTC 80 |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 238295 CGACTGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTC 238239 >seq2044 Length=12966 Score = 80.6 bits (88), Expect = 5e-13 Identities = 128/181 (71%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| | |||||||||||| ||| || ||| || ||||| Sbjct 9881 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCGCGTACCACTTTAAACGGCGAACAGC 9822 Query 107 CCAACGCTTACCGAATTCTGCTTCGGT---ATGATAGGAAGAGCCGACATCGAAGGATCA 163 | || ||| || ||||||| | | ||| || ||||||||||||| | || Sbjct 9821 CGTACCCTTGG-GAC--CTGCTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCA 9765 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || ||| ||||| |||| || ||||| ||| | |||| |||||||| | ||| |||| Sbjct 9764 AACCGCATCGTCGATATGGACTCTTGGATGCGATCAGCCTGTTATCCCCGGCGTACCTTT 9705 Query 224 T 224 | Sbjct 9704 T 9704 >seq6036 Length=8020 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || || |||| ||||| ||||| Sbjct 2682 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCGCTTTCATGGGCGAACAGCCCAACC 2741 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| || | | | || | | ||| || ||||||||||||| | |||| | Sbjct 2742 CTTGGGACGTACTACCGCCCCAGGATGC---GATGAGCCGACATCGAGGTGCCAAACCTC 2798 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||||| ||||| | | |||| ||||||||| ||||||||| Sbjct 2799 CCCGTCGATGTGAACTCTTGGGGGAGATCAGCCTGTTATCCCTAGAGTAACTTTT 2853 >seq2128 Length=5974 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 627 CTGTCTTGCGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 686 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| ||| ||||||||||||| | |||| | Sbjct 687 CTTGGGACC---TTCTCCAGCCCCAGGATGGGACGAGCCGACATCGAGGTGCCAAACCTC 743 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||| | ||||| | | ||||| |||||||| | ||| ||||| Sbjct 744 CCCGTCGATGTGAGCTCTTGGGGGAGATAAGCCTGTTATCCCCGGCGTACCTTTT 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854322796416