Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq6036 217 3e-54 seq2001 215 1e-53 seq2044 196 9e-48 seq5381 194 3e-47 seq939 188 1e-45 seq112 188 1e-45 seq8258 187 5e-45 seq5221 170 4e-40 seq2128 170 4e-40 seq1246 152 1e-34 seq7200 78.8 2e-12 >seq6036 Length=8020 Score = 217 bits (240), Expect = 3e-54 Identities = 185/228 (81%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3062 GGACAGTCTCAGGCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAACGGTAACGGAGGCG 3003 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | ||||| | |||| | | | |||| | | | |||| ||||||| |||| | Sbjct 3002 CACAAAGGTTTCCTCTGAACGTGTAGAAATCGTATCTAGAGTGTAAAGGCATAAGGAAGC 2943 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 ||||||| || ||| |||||| |||||||||||||||||| |||| ||||| | ||||| Sbjct 2942 TTGACTGTGAGACCTACAAGTCGAGCAGGGACGAAAGTCGGTCTTAGTGATCTGACGGTG 2883 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| ||||| ||||||| ||| ||||||||||| ||| || |||||| Sbjct 2882 CTGAGTGGAAAGGCCGTCACTCAACGGATAAAAGTTACTCTAGGGATA 2835 >seq2001 Length=3286380 Score = 215 bits (238), Expect = 1e-53 Identities = 184/227 (81%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 ||||||||| | |||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 2269447 GACAGTGTCTGGCGGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAAAGTAACGGAGGCGT 2269506 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | ||||||| ||| || || || || |||||||||||| ||||| | | Sbjct 2269507 TCAAAGGTTCCCTCAGGCTGGTCGGTAATCAGCCGTCGAGTGCAAAGGCATAAGGGAGCT 2269566 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||||| | || || ||||| |||||||||||| |||| |||||||| ||| | Sbjct 2269567 TGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGACTTAGTGATCCGGTGGTTC 2269626 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 2269627 TGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 2269673 >seq2044 Length=12966 Score = 196 bits (216), Expect = 9e-48 Identities = 232/312 (74%), Gaps = 3/312 (1%) Strand=Plus/Plus Query 29 TACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAAC 88 ||||||||||| |||||||| ||| |||| |||| || || || ||||| Sbjct 9413 TACGCCAGTATGGAAGGAGCCAACCTTGAAATACCACCCTTGCTGGTTTAAGACTCTAAT 9472 Query 89 CGGACGACGTATAACCGTTGACGG-GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTC 147 | | || | | | | || || |||| |||| | ||| |||||||||||||||||| Sbjct 9473 CC--CTACCTGTGATCCAGGAGGGAGACATTGTCTGGTGGGTAGTTTGACTGGGGCGGTC 9530 Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||||||||| | |||||||||| | ||||| | ||||||| || ||||||||| || Sbjct 9531 GCCTCCCAAATAATAACGGAGGCACGCAAAGGTTCCCTCAGGCTGATTGGAAACCAGCCG 9590 Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 | |||||||| ||| ||||| | |||||||| | | || || |||||| |||||| Sbjct 9591 CCGAGTGCAAACGCATAAGGGAGCTTGACTGCAAGAGTGACAGCTCGAGCAGGTACGAAA 9650 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327 || || ||| |||||||| ||| | |||||||| |||| |||||| ||||||||| | Sbjct 9651 GTAGGTGTTAGTGATCCGGTGGTCCCGAATGGAAGGGCCATCGCTCATTGGATAAAAGGT 9710 Query 328 ACCCTGGGGATA 339 || | ||||||| Sbjct 9711 ACGCCGGGGATA 9722 >seq5381 Length=4748 Score = 194 bits (214), Expect = 3e-47 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 ||||||| | ||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct 3910 GACAGTGCTTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGCGTAACGGAGGCTT 3969 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| |||||||||| || ||| |||| |||| | ||||||| ||| ||||||| | Sbjct 3970 TCAAAGGTACCCTCAGCCCGGTTGGTAACCGTGCGTAGAGTGCAATAGCATAAGGGTGCT 4029 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 |||||| || || |||||| |||||| | |||| | || || |||||||| ||| | Sbjct 4030 TGACTGTGAGACAAACAAGTCGAGCAGGTAGGAAACTAGGATATAGTGATCCGGTGGTTC 4089 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || |||||| |||| |||||| | ||||||||| ||| | ||||||| Sbjct 4090 TGTATGGAAAGGCCATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 4136 >seq939 Length=11213 Score = 188 bits (208), Expect = 1e-45 Identities = 170/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| ||||| | |||| Sbjct 10183 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTTCAAAGGTTCCCT 10242 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| | ||| |||| |||| ||||||| ||||||||| | ||||||| || ||| Sbjct 10243 CAGTACGCTTGGTAACCGTGCGATGAGTGCAATAGCAAAAGGGAGCTTGACTGTGAGACC 10302 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| | |||| |||||||| || || |||||||| ||| ||| |||||| ||| Sbjct 10303 GACAAGTCGATCAGGTACGAAAGTAGGATATAGTGATCCGGTGGTTCTGTATGGAAGGGC 10362 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| | ||||||||| ||| | ||||||| Sbjct 10363 CATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 10396 >seq112 Length=422422 Score = 188 bits (208), Expect = 1e-45 Identities = 170/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 |||||||||||||||||||||| ||||||||| |||||||||| | | ||| ||| || Sbjct 158674 GGGCAGTTTGACTGGGGCGGTCTCCTCCCAAAAGGTAACGGAGGAGTACGAAGGTACGCT 158615 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 || || ||| | | | | ||||||| |||||||| ||| |||||||||| ||| Sbjct 158614 TAGGGCGGTCGGACATCGCCCATAAAGTGCAATGGCAAAAGCGTGCTTGACTGCGAGACC 158555 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 | |||||| |||||| |||||| || | || |||||||| ||| ||| |||||| ||| Sbjct 158554 CACAAGTCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGTATGGAAGGGC 158495 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||||||||||| ||| ||||||||| Sbjct 158494 CATCGCTCAACGGATAAAAGGTACTCTGGGGATA 158461 >seq8258 Length=2548 Score = 187 bits (206), Expect = 5e-45 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||| |||| | ||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1853 GGACCGTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGTG 1912 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 ||||| || ||||| |||| ||||| || || |||| || |||||||| || Sbjct 1913 TGCAAAGGTAGGCTCAGACTGGACGGAAATCAGTCGATGAGTGTAATGGCAAAAGCCTGC 1972 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 ||||||||| | | | | ||||| |||||||||||| | || |||||||| ||| Sbjct 1973 CTGACTGCGATATCGACGGATAGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTC 2032 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | |||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 2033 CCGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 2080 >seq5221 Length=2213 Score = 170 bits (188), Expect = 4e-40 Identities = 166/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| ||||| || || Sbjct 1722 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTTCAAAGGTATGCT 1781 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| | ||| |||| | || | ||||||| ||| ||| || ||||||| || ||| Sbjct 1782 CAGTACGCTTGGTAACCGTACGTAGAGTGCAATAGCATAAGCATGCTTGACTGTGAGACC 1841 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| | ||||| |||||| ||| || |||||||| ||| | | |||||| ||| Sbjct 1842 AACAAGTCGATCAGGGTCGAAAGACGGATATAGTGATCCGGTGGTTCCGCATGGAAGGGC 1901 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| | ||||||||| ||| | ||||||| Sbjct 1902 CATCGCTCAAAGGATAAAAGGTACGCCGGGGATA 1935 >seq2128 Length=5974 Score = 170 bits (188), Expect = 4e-40 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||| ||| | ||| ||||||||||||| |||||||||| ||| |||||||||||| Sbjct 1006 GACATTGTGTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAAAGTAACGGAGGCTT 947 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | |||||||| ||| || || |||||| | || | | | | ||||| | | Sbjct 946 GCAAAGGTTCCCTCAGCATGGTCGGTAATCATGCGTAGAGCGTATTAGTATAAGGGAGCT 887 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAA-TGATCCGGCGGTG 291 |||||| || ||| | ||| | |||||||||||||| |||| || |||||||| ||| Sbjct 886 TGACTGGGAGACCGACGGGTCGATCAGGGACGAAAGTC-GGCTAAAGTGATCCGGTGGTT 828 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | |||||| |||| |||||| | ||||||||| ||| | ||||||| Sbjct 827 CCGTATGGAAGGGCCATCGCTCAAAGGATAAAAGGTACGCCGGGGATA 780 >seq1246 Length=14010 Score = 152 bits (168), Expect = 1e-34 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| | |||| |||||| Sbjct 13063 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTCTAAAGGTACCCT 13122 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 || | ||| |||| | |||| || || | ||||||| ||||||| || ||| Sbjct 13123 CATGGCGATTGGTAACCGCCAATAGAGTGTAATGGTATAAGGGTGCTTGACTGTGAGACC 13182 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 | ||| | |||| | |||| | | || || |||||||| ||| | | |||||| ||| Sbjct 13183 GACGGGTCGATCAGGTAGGAAACTAGAGCATAGTGATCCGGTGGTTCCGCATGGAAGGGC 13242 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| | ||||||||| ||| | ||||||| Sbjct 13243 CATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 13276 >seq7200 Length=70127 Score = 78.8 bits (86), Expect = 2e-12 Identities = 87/115 (76%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 |||| |||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 19285 GACAATGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAATGGTAACGCAGGTG 19344 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| | |||||| ||| ||||||| ||| | ||| || |||||||| Sbjct 19345 TCCCAAGGTGAGCTCAGCCAGGACGGAAACCTGGCGTAGAGTAAAAGGGCAAAAG 19399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982311230336