Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq2128 199 4e-49 seq1246 188 8e-46 seq939 187 3e-45 seq5381 181 1e-43 seq8258 159 4e-37 seq2044 150 2e-34 seq112 127 2e-27 seq2001 125 8e-27 seq862 123 3e-26 seq6036 100 3e-19 seq5221 96.9 4e-18 seq2960 89.7 6e-16 >seq2128 Length=5974 Score = 199 bits (220), Expect = 4e-49 Identities = 147/180 (82%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| | Sbjct 1155 CGGGGTCTTTTCGTCCCACTGCGGGTAACCGGCATCTTCACCGATACTTCAATTTCACCG 1214 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 1215 AGCTCATGGCTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 1274 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1275 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1334 >seq1246 Length=14010 Score = 188 bits (208), Expect = 8e-46 Identities = 130/151 (86%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | |||||||| |||||||||||||| |||||||||||||| | Sbjct 12899 CGGGGTCTTTCCGTCCCGTTGCGGGTAAGCGGCATCTTCACCGCTACTACAATTTCACCG 12840 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 12839 AGCTCGTGGCTGAGACAGTGTCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 12780 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 12779 GACAAGGAATTTCGCTACCTTAGGACCGTTA 12749 >seq939 Length=11213 Score = 187 bits (206), Expect = 3e-45 Identities = 144/180 (80%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | ||||||| |||||||||||||| ||||||||||| | | Sbjct 10024 CGGGGTCTTTCCGTCCCGTGGCGGGTAGACGGCATCTTCACCGTCACTACAATTTCGCCG 9965 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 9964 AGCTCACGGCTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 9905 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 9904 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 9845 >seq5381 Length=4748 Score = 181 bits (200), Expect = 1e-43 Identities = 143/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | |||||||| |||||||||||||| | |||||||||||| | Sbjct 3764 CGGGGTCTTTCCGTCCCGTTGCGGGTAAACGGCATCTTCACCGTTGCTACAATTTCACCG 3705 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || ||||||| ||||||||||||||||||||||| |||||| Sbjct 3704 AGCTCATGGCCGAGACAGTGTCCAGATCGTTACACCATTCGTGCAGGTCGGAATTTACCC 3645 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 3644 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 3585 >seq8258 Length=2548 Score = 159 bits (176), Expect = 4e-37 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| || |||||||||| || | | ||||||||||| Sbjct 1697 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAGTTCAATTTCACTG 1638 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 1637 AGTTGATGCTGGAGACAGTGTGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1578 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1577 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1518 >seq2044 Length=12966 Score = 150 bits (166), Expect = 2e-34 Identities = 137/179 (77%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | ||||||| |||||| ||||||| ||| ||||||||| ||| Sbjct 9337 GGGTCTTTCCGTCACGCTGCGGGTAGACGGCATTTTCACCGCCACTTCAATTTCACCGAG 9278 Query 85 CTCAC-GGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | ||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 9277 -TCTCTGGTTGAGACAGTGCGGAGATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 9219 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 9218 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 9160 >seq112 Length=422422 Score = 127 bits (140), Expect = 2e-27 Identities = 118/151 (78%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||||| |||||||||| | | | ||| ||| |||| Sbjct 158846 GGGGTCTTTCCGTCTTTCCGCGGGTAGATTGCATCTTCACAAACATTTCAACTTCGCTGA 158905 Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | |||| || ||||||| ||| |||||||||||||||||||||||||| Sbjct 158906 GTCTCA-GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 158964 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 158965 GACAAGGAATTTCGCTACCTTAGGACCGTTA 158995 >seq2001 Length=3286380 Score = 125 bits (138), Expect = 8e-27 Identities = 133/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | ||||| | |||| ||||||||| || |||| ||| ||||| Sbjct 2269288 GGGTCTTTCCGTCTAGTTGCGGGCACCCGGCTTCTTCACCGGAACAACAAATTCGCTGAG 2269229 Query 85 CTCACGGTT---GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 |||| || ||||||| ||| |||||| |||||||||||||||||| Sbjct 2269228 -TCAC--TTCCCGAGACAGCGCTCCAGTCGTTACGCCATTCATGCAGGTCGGAACTTACC 2269172 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2269171 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 2269112 Query 202 C 202 | Sbjct 2269111 C 2269111 >seq862 Length=13664 Score = 123 bits (136), Expect = 3e-26 Identities = 117/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||| | |||||||||| | | | ||| ||| |||| Sbjct 8235 GGGGTCTTTCCGTCTTGCCGCGGGGAGATTGCATCTTCACAAACATTTCAACTTCGCTGA 8294 Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | |||| || ||||||| ||| |||||||||||||||||||||||||| Sbjct 8295 GTCTCA-GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 8353 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 8354 GACAAGGAATTTCGCTACCTTAGGACCGTTA 8384 >seq6036 Length=8020 Score = 100 bits (110), Expect = 3e-19 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 3220 GGGTCTTTCTGTCCTGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATTTCACCGAG 3279 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| ||| || ||||||| |||| ||||||||| || Sbjct 3280 CCCCTCTCCGAGACAGCATCCAAATCATTACGCCTTTCGTGCGGGTCAGAACTTACCTGA 3339 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 3340 CAAGGAATTTCGCTACCTTAGGACCGTTA 3368 >seq5221 Length=2213 Score = 96.9 bits (106), Expect = 4e-18 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | ||||||| |||||||||||||| ||||||||||||| | Sbjct 1564 CGGGGTCTTTCCGTCCCGTTGCGGGTATCCGGCATCTTCACCGGAACTACAATTTCACCG 1505 Query 83 AGCTCACGGTTGAGACAG 100 |||||| || |||||||| Sbjct 1504 AGCTCATGGCTGAGACAG 1487 >seq2960 Length=8269 Score = 89.7 bits (98), Expect = 6e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 848 TACATCATTCATGCAGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTAGGACCGT 906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547152100164