Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq4979 192 2e-46 seq285 159 9e-37 seq2001 107 5e-21 >seq4979 Length=1283317 Score = 192 bits (212), Expect = 2e-46 Identities = 290/411 (71%), Gaps = 25/411 (6%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 ||||||| || || | | ||| |||||||| || |||||||| |||||||| || |||| Sbjct 40359 CGATCAGAAAGACCTGGCTGGCGCCGGCGCCGAGCGCCGATTCGCGGATGGCGCGCCGCT 40300 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCT-GGGCTGCAGGAAA 119 | ||||| || || | | || |||||||| | | || || || |||||| || Sbjct 40299 CAACCTGAGTCGAGCCGGAGGGTACGCAGATGATGATGCGCGGACTCGGGCTG-----AA 40245 Query 120 CTGTTT----TCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAA 175 | | || ||||| ||||| |||||||| | || ||||| | |||| |||| |||| Sbjct 40244 CAGCTTGGAGTCGTGCACCTTCTTGATGAACTGCTTGAGCATTTGCTCGGTGACGGTGAA 40185 Query 176 GTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCC 235 ||||||||||||||| ||||||||||| || ||| | || |||| || | ||| Sbjct 40184 GTCGGCGATCACGCCATCTTTCATCGGGCGGATGACGCTGATGCTGCCCGGGGCTTTGCC 40125 Query 236 GAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGG---- 291 ||||| |||||| || |||||||||| || ||||| || | |||| Sbjct 40124 AAGCATCTCCTTGGCTTCCTTGCCGACGGCCTGGATGGTTTTC---TTGGCGTGGGGGCC 40068 Query 292 ----TC----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCAC 343 || || ||||| || ||||| || || | ||||||||||||| ||||||| Sbjct 40067 GCCTTCGAGGCGGATGGCGACGACCGAAGGTTCGTCGAGGACGATACCGCTACCGCGCAC 40008 Query 344 GTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 || || || |||||||| ||||| ||||| || | |||||| |||| || Sbjct 40007 ATAGATGAGCGTGTTGGCGGTGCCGAGGTCGATCGCGAGATCGTTGGAGAA 39957 >seq285 Length=31020 Score = 159 bits (176), Expect = 9e-37 Identities = 197/268 (74%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||| | || || | |||||| ||||| ||||| | || |||||||| || | Sbjct 21683 CGATCAGGTAGACATCGCTGGCACCAGCGCCCAGGGCGGCGTCGCGGATGGCGCGTTTTT 21624 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCT---GCAGGA 117 ||||||| ||||| ||| || |||||||| | | || |||||||||| |||| Sbjct 21623 CCACCTGCGTGGAGCCGCAGGGCACGCAGATGATGATGCGCGGGCTGGGCTTGAGCAGCG 21564 Query 118 AACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGT 177 | ||| ||| ||| || |||||| | || | ||||| |||| |||| ||||| Sbjct 21563 AGCTGGG---GTGCACCATGCGGATGAACTGCTTGATCATCTGCTCGGTGACGACGAAGT 21507 Query 178 CGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGA 237 |||||||||||||||||||||| || |||||||| | || ||||| || ||| | Sbjct 21506 CGGCGATCACGCCGTCTTTCATGGGGCGAATGGCTTCGATGTTGCCGGGCACCTTGCCCA 21447 Query 238 GCATGCGCTTGGCCTCGGTGCCGACGGC 265 ||||| ||||||||||| ||| ||||| Sbjct 21446 GCATGGCCTTGGCCTCGGCGCCCACGGC 21419 >seq2001 Length=3286380 Score = 107 bits (118), Expect = 5e-21 Identities = 179/256 (70%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 140 GATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCAT 199 |||||| | || ||||||| |||| | ||||||||| ||||| || |||||||| Sbjct 326833 GATGAAATGCTTGAGCATCTGCTCGGCCATCTCGAAGTCGGCAATCACACCCTCTTTCAT 326892 Query 200 CGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCC 259 ||| || | |||| |||| || || || || ||||| ||||| || || |||| || Sbjct 326893 CGGCCGGACGGCAACAATGTTTCCGGGGGTTCGGCCTAGCATCTTTTTCGCATCGGCACC 326952 Query 260 GACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGATGGCTCATT 319 || || | ||| ||| || | || | | ||| | || || ||||| ||||| || Sbjct 326953 AACCGCCAGGAC-CTTCTCGGTTTTCTTT---TCC--ACCGCGACCACCGAGGGCTCGTT 327006 Query 320 CAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGA 379 ||| ||||| || | | |||| || | || || | ||||| |||| ||| || | Sbjct 327007 CAGAACGATGCCTTTCCCATGCACATATACCAGCGTCGTCGCAGTCCCCAAGTCGATCGC 327066 Query 380 AAGATCGCTGGAAAAC 395 ||||||| |||||||| Sbjct 327067 AAGATCGTTGGAAAAC 327082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353477688704