Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq4979 192 2e-46
seq285 159 9e-37
seq2001 107 5e-21
>seq4979
Length=1283317
Score = 192 bits (212), Expect = 2e-46
Identities = 290/411 (71%), Gaps = 25/411 (6%)
Strand=Plus/Minus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
||||||| || || | | ||| |||||||| || |||||||| |||||||| || ||||
Sbjct 40359 CGATCAGAAAGACCTGGCTGGCGCCGGCGCCGAGCGCCGATTCGCGGATGGCGCGCCGCT 40300
Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCT-GGGCTGCAGGAAA 119
| ||||| || || | | || |||||||| | | || || || |||||| ||
Sbjct 40299 CAACCTGAGTCGAGCCGGAGGGTACGCAGATGATGATGCGCGGACTCGGGCTG-----AA 40245
Query 120 CTGTTT----TCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAA 175
| | || ||||| ||||| |||||||| | || ||||| | |||| |||| ||||
Sbjct 40244 CAGCTTGGAGTCGTGCACCTTCTTGATGAACTGCTTGAGCATTTGCTCGGTGACGGTGAA 40185
Query 176 GTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCC 235
||||||||||||||| ||||||||||| || ||| | || |||| || | |||
Sbjct 40184 GTCGGCGATCACGCCATCTTTCATCGGGCGGATGACGCTGATGCTGCCCGGGGCTTTGCC 40125
Query 236 GAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGG---- 291
||||| |||||| || |||||||||| || ||||| || | ||||
Sbjct 40124 AAGCATCTCCTTGGCTTCCTTGCCGACGGCCTGGATGGTTTTC---TTGGCGTGGGGGCC 40068
Query 292 ----TC----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCAC 343
|| || ||||| || ||||| || || | ||||||||||||| |||||||
Sbjct 40067 GCCTTCGAGGCGGATGGCGACGACCGAAGGTTCGTCGAGGACGATACCGCTACCGCGCAC 40008
Query 344 GTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394
|| || || |||||||| ||||| ||||| || | |||||| |||| ||
Sbjct 40007 ATAGATGAGCGTGTTGGCGGTGCCGAGGTCGATCGCGAGATCGTTGGAGAA 39957
>seq285
Length=31020
Score = 159 bits (176), Expect = 9e-37
Identities = 197/268 (74%), Gaps = 6/268 (2%)
Strand=Plus/Minus
Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60
|||||||| | || || | |||||| ||||| ||||| | || |||||||| || |
Sbjct 21683 CGATCAGGTAGACATCGCTGGCACCAGCGCCCAGGGCGGCGTCGCGGATGGCGCGTTTTT 21624
Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCT---GCAGGA 117
||||||| ||||| ||| || |||||||| | | || |||||||||| ||||
Sbjct 21623 CCACCTGCGTGGAGCCGCAGGGCACGCAGATGATGATGCGCGGGCTGGGCTTGAGCAGCG 21564
Query 118 AACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGT 177
| ||| ||| ||| || |||||| | || | ||||| |||| |||| |||||
Sbjct 21563 AGCTGGG---GTGCACCATGCGGATGAACTGCTTGATCATCTGCTCGGTGACGACGAAGT 21507
Query 178 CGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGA 237
|||||||||||||||||||||| || |||||||| | || ||||| || ||| |
Sbjct 21506 CGGCGATCACGCCGTCTTTCATGGGGCGAATGGCTTCGATGTTGCCGGGCACCTTGCCCA 21447
Query 238 GCATGCGCTTGGCCTCGGTGCCGACGGC 265
||||| ||||||||||| ||| |||||
Sbjct 21446 GCATGGCCTTGGCCTCGGCGCCCACGGC 21419
>seq2001
Length=3286380
Score = 107 bits (118), Expect = 5e-21
Identities = 179/256 (70%), Gaps = 6/256 (2%)
Strand=Plus/Plus
Query 140 GATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCAT 199
|||||| | || ||||||| |||| | ||||||||| ||||| || ||||||||
Sbjct 326833 GATGAAATGCTTGAGCATCTGCTCGGCCATCTCGAAGTCGGCAATCACACCCTCTTTCAT 326892
Query 200 CGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCC 259
||| || | |||| |||| || || || || ||||| ||||| || || |||| ||
Sbjct 326893 CGGCCGGACGGCAACAATGTTTCCGGGGGTTCGGCCTAGCATCTTTTTCGCATCGGCACC 326952
Query 260 GACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGATGGCTCATT 319
|| || | ||| ||| || | || | | ||| | || || ||||| ||||| ||
Sbjct 326953 AACCGCCAGGAC-CTTCTCGGTTTTCTTT---TCC--ACCGCGACCACCGAGGGCTCGTT 327006
Query 320 CAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGA 379
||| ||||| || | | |||| || | || || | ||||| |||| ||| || |
Sbjct 327007 CAGAACGATGCCTTTCCCATGCACATATACCAGCGTCGTCGCAGTCCCCAAGTCGATCGC 327066
Query 380 AAGATCGCTGGAAAAC 395
||||||| ||||||||
Sbjct 327067 AAGATCGTTGGAAAAC 327082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1353477688704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |