Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq112 172 4e-41 seq939 131 1e-28 seq8258 129 4e-28 seq2001 127 1e-27 seq5381 118 7e-25 seq5221 118 7e-25 seq2044 114 9e-24 seq1246 100 2e-19 seq6036 89.7 4e-16 seq2128 82.4 5e-14 >seq112 Length=422422 Score = 172 bits (190), Expect = 4e-41 Identities = 121/138 (88%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| Sbjct 158472 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTG 158531 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| | |||| | ||||||| |||||||| |||||||||||||||| | Sbjct 158532 CTTTCGCACCTGCTCGACTTGTGGGTCTCGCAGTCAAGCACGCTTTTGCCATTGCACTTT 158591 Query 121 CACTACGATTTCCGACCG 138 |||| |||||||| Sbjct 158592 ATGGGCGATGTCCGACCG 158609 >seq939 Length=11213 Score = 131 bits (144), Expect = 1e-28 Identities = 115/141 (82%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| || | ||||||||||||||| ||| Sbjct 10385 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATATCCTA 10326 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| | ||| || | |||| | |||| || |||||| | ||||||| |||||||| | Sbjct 10325 CTTTCGTACCTGATCGACTTGTCGGTCTCACAGTCAAGCTCCCTTTTGCTATTGCACTCA 10266 Query 120 TCACTACGATTTCCGACCGTA 140 || | ||| || || | |||| Sbjct 10265 TCGC-ACGGTTACCAAGCGTA 10246 >seq8258 Length=2548 Score = 129 bits (142), Expect = 4e-28 Identities = 114/139 (82%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 2069 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACGGGACCACCGGATCACTATGACCGA 2010 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||||| || | | ||||| ||| ||| ||||||||||| |||| | Sbjct 2009 CTTTCGTCTCTGCTCTATCCGTCGATATCGCAGTCAGGCAGGCTTTTGCCATTACACTCA 1950 Query 120 TC-ACTACGATTTCCGACC 137 || ||| |||||||| || Sbjct 1949 TCGACT--GATTTCCGTCC 1933 >seq2001 Length=3286380 Score = 127 bits (140), Expect = 1e-27 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| || | |||||||||||||| | || Sbjct 2269662 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCAGAACCACCGGATCACTAAGTCCGA 2269603 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| ||||||| || ||| |||||||| |||||| | ||| |||| ||||||| Sbjct 2269602 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAAGCTCCCTTATGCCTTTGCACT 2269545 >seq5381 Length=4748 Score = 118 bits (130), Expect = 7e-25 Identities = 97/118 (82%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||| |||||| || | ||||||||||||||| ||| Sbjct 4125 TACCTTTTATCCTTTGAGCGATGGCCTTTCCATACAGAACCACCGGATCACTATATCCTA 4066 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | |||||| | ||||| |||| || |||||||| ||| ||| |||||||| Sbjct 4065 GTTTCCTACCTGCTCGACTTGTTTGTCTCACAGTCAAGCACCCTTATGCTATTGCACT 4008 >seq5221 Length=2213 Score = 118 bits (130), Expect = 7e-25 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | ||||||||||||||| || Sbjct 1924 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATATCCGT 1865 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||| || | |||||| |||| || ||||||| ||| ||| |||||||| | Sbjct 1864 CTTTCGACCCTGATCGACTTGTTGGTCTCACAGTCAAGCATGCTTATGCTATTGCACTCT 1805 Query 121 CACTACGATTTCCGACCGTA 140 |||| || || | |||| Sbjct 1804 ACGTACGGTTACCAAGCGTA 1785 >seq2044 Length=12966 Score = 114 bits (126), Expect = 9e-24 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||||||||||| |||||||||||||| |||| Sbjct 9711 TACCTTTTATCCAATGAGCGATGGCCCTTCCATTCGGGACCACCGGATCACTAACACCTA 9652 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | |||||| || ||| |||| ||| |||||| | ||| ||| ||||||| Sbjct 9651 CTTTCGTACCTGCTCGAGCTGTCACTCTTGCAGTCAAGCTCCCTTATGCGTTTGCACT 9594 >seq1246 Length=14010 Score = 100 bits (110), Expect = 2e-19 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 13265 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 13206 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | || | |||| || |||||||| ||| | ||||| |||| Sbjct 13205 GTTTCCTACCTGATCGACCCGTCGGTCTCACAGTCAAGCACCCTTATACCATTACACT 13148 >seq6036 Length=8020 Score = 89.7 bits (98), Expect = 4e-16 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||||||||| || |||| ||||| ||| || | |||||||| |||| Sbjct 2846 TAACTTTTATCCGTTGAGTGACGGCCTTTCCACTCAGCACCGTCAGATCACTAAGACCGA 2905 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | |||| || |||||| ||| |||| || |||| | Sbjct 2906 CTTTCGTCCCTGCTCGACTTGTAGGTCTCACAGTCAAGCTTCCTTATGCCTTTACACTCT 2965 Query 121 CACTACGATTTC 132 ||||||||| Sbjct 2966 AGATACGATTTC 2977 >seq2128 Length=5974 Score = 82.4 bits (90), Expect = 5e-14 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | ||||||||||||| | || Sbjct 791 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTTTAGCCGA 850 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTT 105 |||||| ||| || | || | |||| || |||||| | ||| Sbjct 851 CTTTCGTCCCTGATCGACCCGTCGGTCTCCCAGTCAAGCTCCCTT 895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351970181200