Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq112 172 4e-41
seq939 131 1e-28
seq8258 129 4e-28
seq2001 127 1e-27
seq5381 118 7e-25
seq5221 118 7e-25
seq2044 114 9e-24
seq1246 100 2e-19
seq6036 89.7 4e-16
seq2128 82.4 5e-14
>seq112
Length=422422
Score = 172 bits (190), Expect = 4e-41
Identities = 121/138 (88%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct 158472 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTG 158531
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| | |||| | ||||||| |||||||| |||||||||||||||| |
Sbjct 158532 CTTTCGCACCTGCTCGACTTGTGGGTCTCGCAGTCAAGCACGCTTTTGCCATTGCACTTT 158591
Query 121 CACTACGATTTCCGACCG 138
|||| ||||||||
Sbjct 158592 ATGGGCGATGTCCGACCG 158609
>seq939
Length=11213
Score = 131 bits (144), Expect = 1e-28
Identities = 115/141 (82%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| || | ||||||||||||||| |||
Sbjct 10385 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATATCCTA 10326
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119
|||||| | ||| || | |||| | |||| || |||||| | ||||||| |||||||| |
Sbjct 10325 CTTTCGTACCTGATCGACTTGTCGGTCTCACAGTCAAGCTCCCTTTTGCTATTGCACTCA 10266
Query 120 TCACTACGATTTCCGACCGTA 140
|| | ||| || || | ||||
Sbjct 10265 TCGC-ACGGTTACCAAGCGTA 10246
>seq8258
Length=2548
Score = 129 bits (142), Expect = 4e-28
Identities = 114/139 (82%), Gaps = 4/139 (3%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 2069 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACGGGACCACCGGATCACTATGACCGA 2010
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119
|||||| ||||||||| || | | ||||| ||| ||| ||||||||||| |||| |
Sbjct 2009 CTTTCGTCTCTGCTCTATCCGTCGATATCGCAGTCAGGCAGGCTTTTGCCATTACACTCA 1950
Query 120 TC-ACTACGATTTCCGACC 137
|| ||| |||||||| ||
Sbjct 1949 TCGACT--GATTTCCGTCC 1933
>seq2001
Length=3286380
Score = 127 bits (140), Expect = 1e-27
Identities = 99/118 (84%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||| || | |||||||||||||| | ||
Sbjct 2269662 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCAGAACCACCGGATCACTAAGTCCGA 2269603
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| ||||||| || ||| |||||||| |||||| | ||| |||| |||||||
Sbjct 2269602 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAAGCTCCCTTATGCCTTTGCACT 2269545
>seq5381
Length=4748
Score = 118 bits (130), Expect = 7e-25
Identities = 97/118 (82%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| ||||||||||||| |||||| || | ||||||||||||||| |||
Sbjct 4125 TACCTTTTATCCTTTGAGCGATGGCCTTTCCATACAGAACCACCGGATCACTATATCCTA 4066
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||| | |||||| | ||||| |||| || |||||||| ||| ||| ||||||||
Sbjct 4065 GTTTCCTACCTGCTCGACTTGTTTGTCTCACAGTCAAGCACCCTTATGCTATTGCACT 4008
>seq5221
Length=2213
Score = 118 bits (130), Expect = 7e-25
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| | | ||||||||||||||| ||
Sbjct 1924 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATATCCGT 1865
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||| ||| || | |||||| |||| || ||||||| ||| ||| |||||||| |
Sbjct 1864 CTTTCGACCCTGATCGACTTGTTGGTCTCACAGTCAAGCATGCTTATGCTATTGCACTCT 1805
Query 121 CACTACGATTTCCGACCGTA 140
|||| || || | ||||
Sbjct 1804 ACGTACGGTTACCAAGCGTA 1785
>seq2044
Length=12966
Score = 114 bits (126), Expect = 9e-24
Identities = 96/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| ||||||||||||||||||||| |||||||||||||| ||||
Sbjct 9711 TACCTTTTATCCAATGAGCGATGGCCCTTCCATTCGGGACCACCGGATCACTAACACCTA 9652
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| | |||||| || ||| |||| ||| |||||| | ||| ||| |||||||
Sbjct 9651 CTTTCGTACCTGCTCGAGCTGTCACTCTTGCAGTCAAGCTCCCTTATGCGTTTGCACT 9594
>seq1246
Length=14010
Score = 100 bits (110), Expect = 2e-19
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||
Sbjct 13265 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 13206
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||| | ||| || | || | |||| || |||||||| ||| | ||||| ||||
Sbjct 13205 GTTTCCTACCTGATCGACCCGTCGGTCTCACAGTCAAGCACCCTTATACCATTACACT 13148
>seq6036
Length=8020
Score = 89.7 bits (98), Expect = 4e-16
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| ||||||||||||||| || |||| ||||| ||| || | |||||||| ||||
Sbjct 2846 TAACTTTTATCCGTTGAGTGACGGCCTTTCCACTCAGCACCGTCAGATCACTAAGACCGA 2905
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||| |||||| | |||| | |||| || |||||| ||| |||| || |||| |
Sbjct 2906 CTTTCGTCCCTGCTCGACTTGTAGGTCTCACAGTCAAGCTTCCTTATGCCTTTACACTCT 2965
Query 121 CACTACGATTTC 132
|||||||||
Sbjct 2966 AGATACGATTTC 2977
>seq2128
Length=5974
Score = 82.4 bits (90), Expect = 5e-14
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| | | ||||||||||||| | ||
Sbjct 791 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTTTAGCCGA 850
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTT 105
|||||| ||| || | || | |||| || |||||| | |||
Sbjct 851 CTTTCGTCCCTGATCGACCCGTCGGTCTCCCAGTCAAGCTCCCTT 895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351970181200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |