Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1210 145 8e-33
seq3241 122 9e-26
seq7200 111 2e-22
seq1296 80.6 3e-13
>seq1210
Length=14246
Score = 145 bits (160), Expect = 8e-33
Identities = 143/180 (79%), Gaps = 5/180 (3%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC--TCGAATACATTACCA 68
|||||||| |||||||||||||| ||||||||||||| | ||| | ||||| |||| ||
Sbjct 8271 CTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATATATTAGCA 8212
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
||||||||| ||||||| | | ||||||||| ||||| | | | ||||||
Sbjct 8211 TGGAATAATGAGATAGGACTTTTT-TACTATTTTGTTGGTTTGC-GTAAAGAG-GTAATG 8155
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| |||| ||| ||| |||||| | |||||| ||||||| |||||||||||||||||||
Sbjct 8154 ATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTT 8095
>seq3241
Length=4571
Score = 122 bits (134), Expect = 9e-26
Identities = 110/136 (81%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 56 GAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG 115
||||| ||| |||||||||| ||||||||| | ||||||||||||| ||||||||||
Sbjct 1865 GAATATCTTAGCATGGAATAACGGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGG 1807
Query 116 ACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGA 175
||| ||||||||||| || |||||||| || ||||||||| |||| ||||||
Sbjct 1806 ACCAGA-GTAATGATAAAAGTGGGCGGTCGGGGGCGTAGGTATTCAATCGTCAGAGGTGA 1748
Query 176 AATTCTTGGATTTATT 191
||||||| |||| |||
Sbjct 1747 AATTCTTAGATTGATT 1732
>seq7200
Length=70127
Score = 111 bits (122), Expect = 2e-22
Identities = 134/179 (75%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTACC 67
|| ||||||||||| ||||| ||| | |||||||||||| || || ||| | | |
Sbjct 13848 ACGTTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCATTGAGCCTGAAAAGTCTTGC 13907
Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127
|||||||||| ||||||||| | |||||||||||||| ||||| | ||| | |||||
Sbjct 13908 ATGGAATAATGGAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAAT 13965
Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| | || | ||| || |||||| | |||| || | |||||||||||||||||
Sbjct 13966 GGTTAAGAGGGACAGACGGGGGCATTTGTATGGCGGCGTTAGAGGTGAAATTCTTGGAT 14024
Score = 89.7 bits (98), Expect = 5e-16
Identities = 125/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72
||||| ||||||||||||||| | ||||||| ||| ||| |||||| ||||||
Sbjct 3611 TTTACCTTGAAAAAATTAGAGTGCTCAAAGCGGGCTGATGCCTGAATACTCGTGCATGGA 3670
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
||||| ||||||| | |||||||||||||| ||||| | || | ||||| | |
Sbjct 3671 ATAATGAAATAGGATCT-CGGTTCTATTTTGTTGGTTT-TCTGATCTGAGATAATGGTTA 3728
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| | ||| | |||||| | |||| || | ||||||||||||||||
Sbjct 3729 AGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGA 3781
>seq1296
Length=6398
Score = 80.6 bits (88), Expect = 3e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182
|||||||| |||| ||| ||| ||||| | |||||| ||| |||| |||||||||||||
Sbjct 5215 GTAATGATTAATAGGGACAGTTGGGGGCATTAGTATTTAATAGTCAGAGGTGAAATTCTT 5156
Query 183 GGATTTATT 191
|||||||||
Sbjct 5155 GGATTTATT 5147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511955181440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |