Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq6557 127 3e-27
seq859 114 2e-23
seq2001 84.2 4e-14
>seq6557
Length=877522
Score = 127 bits (140), Expect = 3e-27
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149
||||| |||||||||||||| | | || || || ||| |||| || ||||||| |||||
Sbjct 585132 AGCACGGCAAGGAAGGCTTCCT-GCGGGATCTCAACGCTGCCGACCTGCTTCATACGTTT 585190
Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209
|| ||||||||||| ||||| || || || ||| || | | ||| || ||||||||
Sbjct 585191 CTTGCCGGCCTTTTGTTTCTCCAGGAGTTTCTTCTTGCGCGTAATGTCGCCACCGTAGCA 585250
Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269
|||||||| || | ||| | | ||||||||| || || ||||| ||| |||
Sbjct 585251 CTTGGCCAGGACATCCTTGCGCATGGCCTTGACGTTTTCGCGGGCGATGATGTGCGAGCC 585310
Query 270 AATGGCGGCCTGGATCGCGACGTCG 294
|| || |||||||| ||||| |||
Sbjct 585311 GATTGCAGCCTGGATGGCGACATCG 585335
>seq859
Length=14979
Score = 114 bits (126), Expect = 2e-23
Identities = 154/213 (72%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 81 TCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTT 140
|||| |||||| | || || ||||| |||| | || | || ||| ||| | ||||
Sbjct 4626 TCCACCCTGAGAATGGCCAGAAAGGCCTCTT-GCGGCACCTCGACGGAGCCGATCTGCTT 4684
Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200
||| || || || |||||||| ||||| || |||||||||||||| || | | ||| ||
Sbjct 4685 CATCCGCTTCTTGCCGGCCTTCTGCTTTTCCAGCAGCTTGCGCTTGCGCGTGATGTCGCC 4744
Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGAT 260
||| ||||| |||||||| |||||||| | | ||||||| | ||||| |||||
Sbjct 4745 GCCATAGCACTTGGCCAGCACGTTCTTGCGCAAGGCCTTGATGTCCTCGCGCGCGATGAT 4804
Query 261 CTGCCCGCCAATGGCGGCCTGGATCGCGACGTC 293
| | || |||| ||||| || || |||||
Sbjct 4805 GTTGGCACCGATGGAAGCCTGAATGGCCACGTC 4837
>seq2001
Length=3286380
Score = 84.2 bits (92), Expect = 4e-14
Identities = 137/196 (70%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 92 CACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTT 151
|| ||| || ||||| |||| | || | ||| ||| | ||||| |||||| || || |
Sbjct 2006917 CAGCGCCAGAAAGGCCTCTT-GCGGCACTTCTACGCTCCCCACCGACTTCATCCGCTTCT 2006859
Query 152 TACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATT 211
| || | || |||||||| |||| |||||||||||| | || ||||| |||||||
Sbjct 2006858 TGCCCTCTTTCTGCTTCTCTAGCAACTTGCGCTTACGCGAGATATCGCCGCCATAGCATT 2006799
Query 212 TGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAA 271
| || | |||||||| | | || || || || |||||||||| | || |
Sbjct 2006798 TCGCGATGACGTTCTTCTTCATCGCGCCGATCGACTCGCGGGCAATGATCTTCGTCCCGA 2006739
Query 272 TGGCGGCCTGGATCGC 287
| || |||||||| ||
Sbjct 2006738 TCGCCGCCTGGATGGC 2006723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838324242176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |