Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1210 233 4e-59 seq7200 214 3e-53 seq1296 212 1e-52 seq3241 147 4e-33 >seq1210 Length=14246 Score = 233 bits (258), Expect = 4e-59 Identities = 216/267 (81%), Gaps = 10/267 (4%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCGGCTCAAGCCGATG---GAAGTTTGAGGCAATAACAG 123 || |||||||||||||||| | || | | |||| || | | | ||| ||||||| Sbjct 7639 GCTGGCTTCTTAGAGGGACGTGCAT-TCTATCAGATGCAGGAGGATAGTGGCTATAACAG 7581 Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 7580 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAG 7521 Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGAT 241 || | |||||||||| ||| ||||| |||||| |||||| ||| ||||| | ||||| Sbjct 7520 TT--TTACCTTGGCCGAGAGGCCTGGGCAATCTT-TTAAAC-CTGCATCGTGATAGGGAT 7465 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 ||| |||||||||||| |||| |||||||||| |||||||| ||| |||||| Sbjct 7464 AGATTATTGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAACGCAAATCATCAATTT 7405 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||||||||||| Sbjct 7404 GCATTGATTACGTCCCTGCCCTTTGTA 7378 >seq7200 Length=70127 Score = 214 bits (236), Expect = 3e-53 Identities = 204/256 (80%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 |||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||||| Sbjct 4248 TCTTAGAGGGACAAGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTGAT 4305 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||| | |||| ||||||||||||||||| || || || | | | ||| Sbjct 4306 GCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAACC 4364 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 | |||| |||| | ||||| | | ||| || |||| | ||||||| | |||||| Sbjct 4365 ATTGCCGAAAGGCATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATAGGGAATTGCA 4424 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||||| Sbjct 4425 ATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATTAC 4484 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 4485 GTCCCTGCCCTTTGTA 4500 Score = 181 bits (200), Expect = 2e-43 Identities = 200/260 (77%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||| | |||| | | || || ||| || ||| ||||||||||||||| Sbjct 14554 CTTCTTAGAGGGACAAGCGGCGTGACAGTCGCACGAAATT-GAG-CAATAACAGGTCTGT 14611 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCAT 188 ||||||||||||||| | |||||||||| |||||||| |||| | |||||||| | Sbjct 14612 GATGCCCTTAGATGTCCGGGGCCGCACGTGCGCTACAATGACGGTTTCAACGAGTATGGA 14671 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||| | ||| |||| |||| || || | | | | |||||| ||||| | | | Sbjct 14672 AACCTGGCCCGAAAGGGTTGGGCAAACTGGATCATAACCGTCGTGACTGGGATCGGGGCT 14731 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| || | | | |||||||||| ||| ||||| || ||||| ||| ||| ||| Sbjct 14732 TGCAATTGTTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCTGA 14791 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 14792 TTACGTCCCTGCCCTTTGTA 14811 >seq1296 Length=6398 Score = 212 bits (234), Expect = 1e-52 Identities = 206/261 (79%), Gaps = 7/261 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCG-GCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||||| | || ||||| |||||||||| |||||||||||||||||| Sbjct 4700 CTTCTTAGAGGGACTATTGTGCAAGAAGCCAATGGAAGTTTAAGGCAATAACAGGTCTGT 4641 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||| |||| || || ||||||||||||| |||| |||| | || |||| | Sbjct 4640 GATGCCCCTAGACGTGCTCGGCCGCACGCGCGTTACAATGACTGGCTCAGAAAGTTTTT- 4582 Query 190 ACCTTGGCC--GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | || || ||||||| |||||||||| |||| | |||||| | ||||||| | Sbjct 4581 --CCTGTCCTGGGAAGGTACGGGTAATCTTATTAATACCAGTCGTGTTAGGGATAGTTCT 4524 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||| |||| | | |||| |||||||||| |||||||| || ||||||||| |||||| Sbjct 4523 TTGGAATTTTGGATCTTGAACGAGGAATTTCTAGTAAGTGCAAGTCATCAGCTTGCGTTG 4464 Query 308 ATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||| |||||| Sbjct 4463 ATTATGTCCCTGCCGTTTGTA 4443 >seq3241 Length=4571 Score = 147 bits (162), Expect = 4e-33 Identities = 209/308 (68%), Gaps = 51/308 (17%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||| ||||||||| | |||| |||| |||||| | ||||||||||||||||||| Sbjct 1053 CTTCCTAGAGGGACAACTGGCTTTTAGCCAGCGGAAGTATTAGGCAATAACAGGTCTGTG 994 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||| |||||||||||||||||||| |||||| ||| | || |||||| | | Sbjct 993 ATGCCCTTTGATGTTCTGGGCCGCACGCGTGCTACAATGATGAACTCAGCGAGTTTACAA 934 Query 191 --------------------------------------------------CCTTGGCCGG 200 ||| ||||| Sbjct 933 GCTGGTAAAACTTGGTACAATAAATATTGTTACTAAAGCCAGTAAGTATGCCTGGGCCGA 874 Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 |||| ||||||||||| | ||| | | |||| |||||||||| | ||| ||||| | Sbjct 873 GAGGTTTGGGTAATCTTTTCAAAGTTTATCGTAATGGGGATAGACCTTTGTAATTAGCGG 814 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||| |||||||||| ||||||||| || ||||||||| ||| ||||||||||||||| Sbjct 813 TCTTGAACGAGGAATCCCTAGTAAGTGCAGGTCATCAGCCTGCGCTGATTACGTCCCTGC 754 Query 321 CCTTTGTA 328 |||||||| Sbjct 753 CCTTTGTA 746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947114411008