Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1210 233 4e-59
seq7200 214 3e-53
seq1296 212 1e-52
seq3241 147 4e-33
>seq1210
Length=14246
Score = 233 bits (258), Expect = 4e-59
Identities = 216/267 (81%), Gaps = 10/267 (4%)
Strand=Plus/Minus
Query 67 GCCGGCTTCTTAGAGGGACTATCGGCTCAAGCCGATG---GAAGTTTGAGGCAATAACAG 123
|| |||||||||||||||| | || | | |||| || | | | ||| |||||||
Sbjct 7639 GCTGGCTTCTTAGAGGGACGTGCAT-TCTATCAGATGCAGGAGGATAGTGGCTATAACAG 7581
Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 7580 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAG 7521
Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGAT 241
|| | |||||||||| ||| ||||| |||||| |||||| ||| ||||| | |||||
Sbjct 7520 TT--TTACCTTGGCCGAGAGGCCTGGGCAATCTT-TTAAAC-CTGCATCGTGATAGGGAT 7465
Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301
||| |||||||||||| |||| |||||||||| |||||||| ||| ||||||
Sbjct 7464 AGATTATTGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAACGCAAATCATCAATTT 7405
Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||||||||||||||||||||||||
Sbjct 7404 GCATTGATTACGTCCCTGCCCTTTGTA 7378
>seq7200
Length=70127
Score = 214 bits (236), Expect = 3e-53
Identities = 204/256 (80%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 74 TCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
|||||||||||| | ||||| | ||||| || | ||||| ||||||||||||||||||
Sbjct 4248 TCTTAGAGGGACAAGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTGAT 4305
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||| | |||| ||||||||||||||||| || || || | | | |||
Sbjct 4306 GCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAACC 4364
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
| |||| |||| | ||||| | | ||| || |||| | ||||||| | ||||||
Sbjct 4365 ATTGCCGAAAGGCATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATAGGGAATTGCA 4424
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
|||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||||||||
Sbjct 4425 ATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATTAC 4484
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 4485 GTCCCTGCCCTTTGTA 4500
Score = 181 bits (200), Expect = 2e-43
Identities = 200/260 (77%), Gaps = 5/260 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129
|||||||||||||| | |||| | | || || ||| || ||| |||||||||||||||
Sbjct 14554 CTTCTTAGAGGGACAAGCGGCGTGACAGTCGCACGAAATT-GAG-CAATAACAGGTCTGT 14611
Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCAT 188
||||||||||||||| | |||||||||| |||||||| |||| | |||||||| |
Sbjct 14612 GATGCCCTTAGATGTCCGGGGCCGCACGTGCGCTACAATGACGGTTTCAACGAGTATGGA 14671
Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248
|||| | ||| |||| |||| || || | | | | |||||| ||||| | | |
Sbjct 14672 AACCTGGCCCGAAAGGGTTGGGCAAACTGGATCATAACCGTCGTGACTGGGATCGGGGCT 14731
Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308
||||||| || | | | |||||||||| ||| ||||| || ||||| ||| ||| |||
Sbjct 14732 TGCAATTGTTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCTGA 14791
Query 309 TTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||
Sbjct 14792 TTACGTCCCTGCCCTTTGTA 14811
>seq1296
Length=6398
Score = 212 bits (234), Expect = 1e-52
Identities = 206/261 (79%), Gaps = 7/261 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCG-GCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129
||||||||||||||||| | || ||||| |||||||||| ||||||||||||||||||
Sbjct 4700 CTTCTTAGAGGGACTATTGTGCAAGAAGCCAATGGAAGTTTAAGGCAATAACAGGTCTGT 4641
Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189
||||||| |||| || || ||||||||||||| |||| |||| | || |||| |
Sbjct 4640 GATGCCCCTAGACGTGCTCGGCCGCACGCGCGTTACAATGACTGGCTCAGAAAGTTTTT- 4582
Query 190 ACCTTGGCC--GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247
| || || ||||||| |||||||||| |||| | |||||| | ||||||| |
Sbjct 4581 --CCTGTCCTGGGAAGGTACGGGTAATCTTATTAATACCAGTCGTGTTAGGGATAGTTCT 4524
Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307
||| |||| | | |||| |||||||||| |||||||| || ||||||||| ||||||
Sbjct 4523 TTGGAATTTTGGATCTTGAACGAGGAATTTCTAGTAAGTGCAAGTCATCAGCTTGCGTTG 4464
Query 308 ATTACGTCCCTGCCCTTTGTA 328
|||| ||||||||| ||||||
Sbjct 4463 ATTATGTCCCTGCCGTTTGTA 4443
>seq3241
Length=4571
Score = 147 bits (162), Expect = 4e-33
Identities = 209/308 (68%), Gaps = 51/308 (17%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||| ||||||||| | |||| |||| |||||| | |||||||||||||||||||
Sbjct 1053 CTTCCTAGAGGGACAACTGGCTTTTAGCCAGCGGAAGTATTAGGCAATAACAGGTCTGTG 994
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||| |||||||||||||||||||| |||||| ||| | || |||||| | |
Sbjct 993 ATGCCCTTTGATGTTCTGGGCCGCACGCGTGCTACAATGATGAACTCAGCGAGTTTACAA 934
Query 191 --------------------------------------------------CCTTGGCCGG 200
||| |||||
Sbjct 933 GCTGGTAAAACTTGGTACAATAAATATTGTTACTAAAGCCAGTAAGTATGCCTGGGCCGA 874
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
|||| ||||||||||| | ||| | | |||| |||||||||| | ||| ||||| |
Sbjct 873 GAGGTTTGGGTAATCTTTTCAAAGTTTATCGTAATGGGGATAGACCTTTGTAATTAGCGG 814
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
|||| |||||||||| ||||||||| || ||||||||| ||| |||||||||||||||
Sbjct 813 TCTTGAACGAGGAATCCCTAGTAAGTGCAGGTCATCAGCCTGCGCTGATTACGTCCCTGC 754
Query 321 CCTTTGTA 328
||||||||
Sbjct 753 CCTTTGTA 746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947114411008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |