Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1210 637 2e-180 seq7200 531 2e-148 seq1296 491 1e-136 seq3132 435 1e-119 seq5201 291 3e-76 seq1924 89.7 2e-15 >seq1210 Length=14246 Score = 637 bits (706), Expect = 2e-180 Identities = 465/533 (87%), Gaps = 11/533 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| |||||||||||||| ||||| Sbjct 4058 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTGACCTTAGGACACCTGTGTTATT 4117 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| |||| | | || | | Sbjct 4118 CTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGTTGTCTCC--CGCGTAGC 4175 Query 127 GGCCCGCGAAGGAC--CTTAACGCCAGAAA-ATGGTCGGTGAAGAC-CAG--TTCCGCTT 180 | || | ||| ||||| | |||| | || | | |||| | | | | | | | Sbjct 4176 TCACTGCACAAGACAGCTTAAGACTAGAACCAGGGCCCGCGAAGGCACTGGATGCTACAT 4235 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCC 240 || || ||||||||| ||| || | |||||||||||||| ||||||||| ||||| Sbjct 4236 CACGGAATAAGTAAAACAACATTACGAGTAGTGGTATTTCATGTGCGCCGAA---GCTCC 4292 Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 4293 CACTTATTCTACACCTCATAAGTCATTTCACAACGTCGGACTAGAGTCAAGCTCAACAGG 4352 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 4353 GTCTTCTTTCCCCGCTGATTCTTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATAG 4412 Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4413 TAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGACGA 4472 Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4473 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 4532 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4533 ATTCCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 4585 >seq7200 Length=70127 Score = 531 bits (588), Expect = 2e-148 Identities = 435/525 (83%), Gaps = 13/525 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 9253 CTTTTACTCTACGAGAGGTTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCTGCGTTACG 9194 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| || | || || Sbjct 9193 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCGGCGCGAGTC 9134 Query 127 G---GCCCGCGAAGGACCTTAACG-----CCAGAA--AATGGTCGGTGAAGACCAGTTC- 175 | | || | ||| || || |||||| || || | | | || ||| Sbjct 9133 GTACGGCCACCAAGCGGCTGCACTTTGTACCAGAATGAAGAACCGTTTAGGTTCAATTCT 9074 Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG 235 || | | || |||||||| || |||| | |||||||||||||||| | | || | Sbjct 9073 CGTCTTACCGAATAAGTAAAGAATCGATGAAAGTAGTGGTATTTCACTGTTGGCAAAGC- 9015 Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||| |||||||||||| | | |||||| |||||||||||||||||||||| Sbjct 9014 -CTCCCACTTATGCTACACCTCTCATGACTCTTCACAGAGTCGGACTAGAGTCAAGCTCA 8956 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 8955 ACAGGGTCTTCTTTCCCCGCTGTGTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 8896 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| | | Sbjct 8895 GATAGTAGATAGGGACAGTAGGAATCTCGATAATCCATTCATGCGCGTCAGTAATTGGCT 8836 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8835 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 8776 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8775 GTTGAATTTCTTCACTTTTACATTCAGAGCACTGGGCAGAAATCA 8731 Score = 499 bits (552), Expect = 1e-138 Identities = 330/368 (90%), Gaps = 11/368 (3%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234 ||| || | ||| |||| ||| |||| || | ||| ||||||||||||| |||| || | Sbjct 19148 CCGTTTTACTGAATAAGCAAAGAAACAATGACGGTGGTGGTATTTCACTGACGCCAAACC 19089 Query 235 G-----------GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTA 283 |||||||||||||||||||| ||| ||| |||||||||||||||| Sbjct 19088 CCGAAGGATCTAGCTCCCACTTATTCTACACCCGTCATGTCTCCTCACAAAGTCGGACTA 19029 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 19028 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCT 18969 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18968 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 18909 Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18908 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 18849 Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 18848 TACCCGCGCTTGATTGAATTTCTTCACATTGACATTCAGAGCACTGGGCAGAAATCACAT 18789 Query 524 TGCGTCAA 531 |||||||| Sbjct 18788 TGCGTCAA 18781 Score = 134 bits (148), Expect = 5e-29 Identities = 100/116 (86%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 |||| |||| |||||||||||||| | |||||||||||||||||||||| ||||||| | Sbjct 49345 CTCGATAATGGATTCATGCGCGTCAATTATTAGATGACGAGGCATTTGGCCACCTTAAAA 49286 Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||| ||| ||||| |||| || |||||||||| |||||| Sbjct 49285 GAGTCATAGTTACTCCC-AGATTTTCCCGCTCTTGCTTAAATTTCTTCATTTTGAC 49231 Score = 96.9 bits (106), Expect = 1e-17 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| || |||| || || |||| | |||| |||||||||||||| Sbjct 19391 CTTTTACTCTACGCCAGGTTTCCGTCCTGGCTGAGCTCACCTTGGGACACCTGCGTTACC 19332 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117 ||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| Sbjct 19331 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACATTGTCTTCA 19281 >seq1296 Length=6398 Score = 491 bits (544), Expect = 1e-136 Identities = 429/528 (81%), Gaps = 9/528 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||| |||||| |||| | |||||||| ||||||||||| Sbjct 1071 CTTTTGTTCTACGTGAGATTTCCGTTCTCACTGAGCTACACTTAGGACGCCTGCGTTATG 1130 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||| | ||||||||| |||||||||| ||| || ||||| | | ||| Sbjct 1131 GTTTAACAGGCATTCCGCCCCAGACAAACTCCCCCCCTAACCATGTCTTTCGCAAAAATC 1190 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCG-CTTCATTG 185 | | | | | ||||| |||| |||| | ||||||| ||||| Sbjct 1191 AGACGAAAATCGCCTTTAACTTTAGAAC-TGGTTTGC----ACCAGTTTTTTCTTCACGA 1245 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | |||| |||| || | |||||||||| || || || | || ||||||| | Sbjct 1246 AATAAGCAAAATGACTACGTGGGTAGTGGTTTTACAG--GCTCGATTACT-CTCCCACCT 1302 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 | ||| ||| | | | ||||||||||||| ||||||||||||||||||||||||||| Sbjct 1303 AGGCTATACCCCACGTGCCATTTCACAAAGTTAGACTAGAGTCAAGCTCAACAGGGTCTT 1362 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||| Sbjct 1363 CTTTCCCCGCTGATTATTCTAAGCCCGTTCCCTTAGCTGTGGGTTCGCTAGATAGTAGAT 1422 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1423 AGGGACAGTGGTAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1482 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1483 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTGC 1542 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 1543 GTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCATCA 1590 >seq3132 Length=12859 Score = 435 bits (482), Expect = 1e-119 Identities = 276/299 (92%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| |||||||||||| || ||| |||||||| | | ||||||||||||||||| Sbjct 1148 CTCCCACCTATTCTACACCTTCCACGTCTTTTCACAATGCCAAACTAGAGTCAAGCTCAA 1207 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1208 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 1267 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||| ||||||||||| ||| || |||||||| |||||||||||||||| ||| Sbjct 1268 ATAGTAAGTAGGGACAGTGAAGGTCTAATTGATCCATTCGTGCGCGTCACTAATTAAATG 1327 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1328 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 1387 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1388 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACTTTGCGTCAACATC 1446 Score = 235 bits (260), Expect = 2e-59 Identities = 133/135 (99%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9950 CGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 10009 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10010 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 10069 Query 521 CATTGCGTCAACATC 535 | ||||||||||||| Sbjct 10070 CTTTGCGTCAACATC 10084 Score = 143 bits (158), Expect = 9e-32 Identities = 96/107 (90%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| |||||| ||||| ||||||||||||||| Sbjct 677 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTTGCCCTTTGGACACCTGCGTTATT 736 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 737 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACCATGTC 783 >seq5201 Length=125298 Score = 291 bits (322), Expect = 3e-76 Identities = 167/171 (98%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 65464 AAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCTGTGGT 65405 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65404 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 65345 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65344 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 65294 >seq1924 Length=238468 Score = 89.7 bits (98), Expect = 2e-15 Identities = 94/126 (75%), Gaps = 11/126 (9%) Strand=Plus/Minus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAA-----------A 233 || ||||| | ||||||| || |||||||||| ||||| ||| || | Sbjct 229866 GAGTAAGTGAGGAAACGATGAGAGTAGTGGTATCTCACTGGCGGCGCCGCGCGAGCGCGA 229807 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 || |||||||||||||| ||||||||| ||| |||||| | | |||||||||||||| Sbjct 229806 CGCCTCCCACTTATTCTGCACCTCTCATGTCTCCTCACAATGCCAAACTAGAGTCAAGCT 229747 Query 294 CAACAG 299 |||||| Sbjct 229746 CAACAG 229741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635052243328