Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1296 125 1e-26
seq1210 107 3e-21
seq7200 100 5e-19
seq3132 95.1 2e-17
>seq1296
Length=6398
Score = 125 bits (138), Expect = 1e-26
Identities = 100/118 (85%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| | || ||||| |||||||| | ||| ||||||| || || |
Sbjct 347 GTACGAGAGGAACC-CTTAAATCAGA-TAATTGGTAAATACGGTTGTCTGAAAAGACAAT 290
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118
|||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct 289 GCCGTGAAGCTACCATCTGTTGGATTATGACTGAAGGCCTCTAAGTCAGAATCCATGC 232
>seq1210
Length=14246
Score = 107 bits (118), Expect = 3e-21
Identities = 97/118 (82%), Gaps = 3/118 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || || ||||| | |||| || |||| ||| || |
Sbjct 3732 GTACGAGAGGAACCGTTGG-TTCGGA-TATTTGGTAAT-GCGGTTGGCTGAGCAGCCAAT 3676
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118
||||| |||||| |||| | |||||||| ||||||||||||||||||||||||||||
Sbjct 3675 GCCGCAAAGCTATCATCCGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 3618
>seq7200
Length=70127
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || | || | | || |
Sbjct 9578 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGCCGAACGGCCAAT 9635
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 9636 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 9689
Score = 91.5 bits (100), Expect = 2e-16
Identities = 90/114 (79%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| |||| | ||| || | || |
Sbjct 19747 GTACGAGAGGAACCGCAGG-TTCAGAC-ACTTGGTATTTGTGCCTGGTCGAAAGGCCATT 19804
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||| | ||||||||||||||||| ||||||
Sbjct 19805 GGTGCGAAGCTACCATCTGAGGGATTAGGACTGAACGCCTCTAAGTCTGAATCC 19858
>seq3132
Length=12859
Score = 95.1 bits (104), Expect = 2e-17
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86
|| |||||| | ||||| || ||| || ||||||||||| |||| ||| || |||||
Sbjct 328 ATCATTGGTATATGCGGTTGGTTGAAAAGCCAGTGCCGCGATGCTAACATGTGTTGGATA 269
Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123
| ||||||||||||||||||| |||||||| | ||||
Sbjct 268 ACGGCTGAACGCCTCTAAGTCGGAATCCATTCTAGAA 232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819128290304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |