Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1210 556 4e-156 seq7200 464 2e-128 seq1296 293 7e-77 seq3241 286 1e-74 >seq1210 Length=14246 Score = 556 bits (616), Expect = 4e-156 Identities = 432/505 (86%), Gaps = 12/505 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||| | ||||| | | |||| | || |||||||||||||||||| Sbjct 8496 GTTCTCATTCCAATTGCCAGACCAATGATGGCCCGGCATTGTTATTTATTGTCACTACCT 8555 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8556 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 8615 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||| Sbjct 8616 TCTCAGGCTCCCTCTCCGGAATCAAACCCTAATTTCCCGTTACCCGTTAAAGCCATGGTA 8675 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || ||||||||| |||| |||||||||||||| |||||||| ||||||||||| Sbjct 8676 GGCCAATACCCTACCATCCAAAGCTGATAGGGCAGAAACTTGAATGATCCATCGCCGGC- 8734 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | | |||||||||| || | ||||||||| |||||| |||||||||| ||||| Sbjct 8735 CGAAGCCATGCGATCCGCAAGCTTATTATGATTCACCACATCACCCCGAAGGG-GTTGG- 8792 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCTCTA 359 ||| ||||||||||||| ||| | ||| |||| || | |||||||||||||||| Sbjct 8793 TTTCCATCTAATAAATACTACCC--CAGAA----GGGTATTGACGCATGTATTAGCTCTA 8846 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| Sbjct 8847 GAATTACTACGGTTATCCAAGTAGTAAGGGACTATCAAATAAATTATAACTGATATAATG 8906 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||| |||||||||||| ||| ||| | |||||||||||||||||||||||||||||| Sbjct 8907 AGCCGTTCGCAGTTTCAAAGTA-AGA-TATTTATACTTAGACATGCATGGCTTAATCTTT 8964 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||| ||| ||||||||||||||| Sbjct 8965 GAGACGAGCGTATGACTACTGGCAG 8989 >seq7200 Length=70127 Score = 464 bits (514), Expect = 2e-128 Identities = 427/530 (81%), Gaps = 29/530 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||| |||||| || | | ||| || ||||| |||||| | ||||||||| Sbjct 13534 GTACTCATTCGAATTACGGAGCCTCTGTTGAGTCCCGTATCCGTATTTTTCGTCACTACC 13475 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 13474 TCCCCGTACCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAAGTGGTAGCCGT 13415 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 13414 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATCACCATGGT 13355 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||| ||||||||||||| ||||||| || || |||||| | Sbjct 13354 AGGCAGGTCACCTACCATCGAAAATTGATAGGGCAGACATTTGAAAGATCCGTCGCCGAC 13295 Query 240 TCAAGGCC--ATGCGATTCGTTAAGTTATTATGA---ATCAC------CAA--GGAGC-C 285 ||||||| |||||| || ||||||| || ||||| ||| | ||| Sbjct 13294 ACAAGGCCGACTGCGATCAGTGAAGTTATCCAGAGTCATCACAGAAGTCAACGGTAGCAG 13235 Query 286 CCGAAG------GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAGTC-G 334 |||||| ||||||| | | |||||||||| ||||| |||| ||| | Sbjct 13234 CCGAAGCCACAACCGGTTGGTTCTGT-TCTAATAAATCCACCCGTTCCCTTGCGGGTCAG 13176 Query 335 GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394 || | | ||||||||||||||||||||||| || |||||||||||||| | |||| || Sbjct 13175 GGCATAGTGGCATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAGT-ATGTACGAT 13117 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 | || ||| ||| ||||||||||||||||||||| ||||||| || | || | | || Sbjct 13116 CTAAGGAACCATAGCTGATTTAATGAGCCATTCGCGGTTTCACCGT-TTGAAGGTATGTA 13058 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 13057 CTTAGACATGCATGGCTTAATCTCTGAGACAAGCATATGACTACTGGCAG 13008 Score = 389 bits (430), Expect = 1e-105 Identities = 392/501 (78%), Gaps = 8/501 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | | || ||| | || || ||||| | |||||||||| Sbjct 3384 GTACCCATTCCGATAACCGGCCTCGAA-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 3326 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | || || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3325 CCTCATGCCGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3266 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 3265 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 3206 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || | ||||||| Sbjct 3205 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGACACTTGATAGACACGTCGCCGGTG 3146 Query 241 CAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACCAA--GGAGCCCCGAAGGGCGTT 297 |||| ||||||||| | | || |||| || ||||||| | | | |||| || | Sbjct 3145 CAAGACCATGCGATCAGCCATAGCTATTCAGAGTCACCAATTGACGAGCAGAAGCCCGAT 3086 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATTAGCT 356 | |||| |||||||| || | | | | | |||||| | ||| ||||||||||||| Sbjct 3085 TGGTTTTAATCTAATAGATGCGCTCGTCCGTTAGTCGGAGCTTTGGTGCATGTATTAGCT 3026 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGT-ACTATCAAATAAACGATAACTGATTT 415 ||||||||||||| |||||||| |||| | | | ||||| || | ||| ||| | | Sbjct 3025 CTAGAATTACCACAGTTATCCACGTAGGATTATCAAGATCAAGTACATTATAGCTGTTAT 2966 Query 416 AATGAGCCATTCGCAGTTTCA-CTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||| ||||| |||||| || ||||| | || |||||||||||||||||||| Sbjct 2965 AATGAGCCGTTCGCGGTTTCACCTTTATAG-GTATTTGAACTTAGACATGCATGGCTTAG 2907 Query 475 TCTTTGAGACAAGCATATGAC 495 ||||||||||||||||| || Sbjct 2906 CCTTTGAGACAAGCATATAAC 2886 >seq1296 Length=6398 Score = 293 bits (324), Expect = 7e-77 Identities = 352/468 (75%), Gaps = 18/468 (4%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT-C 101 ||||| |||||||| ||||| | | ||||||| ||||| | ||||||||| | Sbjct 5743 TATTTCTTGTCACTGGCTCCCTGAATTAGGATTGGCCAATTTTCTTCCCTGCTGCCGAAC 5802 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 | | | ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 5803 CGTAGTTGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGGAATCGAACCCTAATTCTCCGTT 5862 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 |||||| | ||||||||| ||| || |||||||||| || |||||||||||||| || Sbjct 5863 ACCCGTGACTGCCATGGTAGTCCAATACACTACCATCGAGAGCTGATAGGGCAGAAACTT 5922 Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCA--CCAA 279 |||| |||| | |||| | ||||||| | ||||| | ||| ||| ||| Sbjct 5923 AGATGATTTATCGTAG---CAAG---CTACGATTCGATCAGTTACTTTGATTCATCTCAA 5976 Query 280 GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAG---TCGGG 336 | | | | | ||||||| |||||||||||||| || || || ||| Sbjct 5977 TCA-CATTGCTGTG-ATTGGTTTAATATCTAATAAATACGTTCCGGTCGCAGGACACGGA 6034 Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCA 396 |||| ||||||||||||| | | ||||| | |||||||||||||| | | ||||| Sbjct 6035 ATTTTAAGCATGTATTAGCCCAACAATTAGCTCGGTTATCCATGTAATTTTTAATTATCA 6094 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 ||||||| ||||||| ||||||||||||||||||||||| ||| | | | || | ||| Sbjct 6095 AATAAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCGCTG--TTCAATACTGA-ACT 6151 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| ||||| ||| ||||||||||||| |||||||| Sbjct 6152 GGCACATGCATGGGTTAATATTTAAGACAAGCATATG-TAACTGGCAG 6198 >seq3241 Length=4571 Score = 286 bits (316), Expect = 1e-74 Identities = 209/239 (87%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||||||| || | |||||||||||||||||||||||||||| ||| Sbjct 2408 TATTTCTTGTCACTACCTCCCTGTATTAGGATTGGGTAATTTGCGCGCCTGCTGCCATCC 2467 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2468 GTGGACATGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 2527 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 2528 CCCGTAATCACCATGGTAGGCCCCTATCCTACCATC-TAAGTTGATAGGGCAGAAATTTG 2586 Query 223 AATGAACCATCGC-CGGCTCAAGGC--CATGCGATTCGTTAAGTTATTATGAATCACCA 278 ||||| ||||||| | | || || ||||||||| ||||||||||||||||||| Sbjct 2587 AATGACCCATCGCACAGTCAAAAGCTGTTTGCGATTCGCAAAGTTATTATGAATCACCA 2645 Score = 230 bits (254), Expect = 7e-58 Identities = 151/165 (92%), Gaps = 5/165 (3%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA----GGTACTATCAAAT 399 |||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2854 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTATTTTGGGCACTATCAAAT 2913 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 ||| ||||| |||||| |||||||||||||||||||||||||| |||| |||||||||| Sbjct 2914 AAATTATAACCGATTTATTGAGCCATTCGCAGTTTCACTGTATA-ATTGTTTATACTTAG 2972 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 2973 ACATGCATGGCTTAATCTTTTAGACAAGCATATGACCACTGGCAG 3017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510263520256