Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq112 141 1e-28 seq3574 116 6e-21 >seq112 Length=422422 Score = 141 bits (156), Expect = 1e-28 Identities = 189/258 (73%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 196109 GGCCACGACAAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCT-CGGCGCACAGAT 196167 ||||| || ||| | ||||||||||| || ||||| ||| | ||| |||| ||||| Sbjct 129461 GGCCATGAAAAATCCGACCGTACCGGTACCGGCACC-CGTTCCGTCTTCGGCTGGCAGAT 129403 Query 196168 GCGCTTCGATCTG--CAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGT 196225 ||| ||||| ||| |||| || || ||| || ||||| ||||| || || || Sbjct 129402 GCGTTTCGACCTGGCCAAG--GGCTTTCCGGTGACGACCACCAAGAAGCTGCACCTCAAG 129345 Query 196226 TCCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAAT 196285 || |||||||| ||| || |||||||| | | || |||||||||||| |||||| | Sbjct 129344 TCAATCATTCACGAATTGTTGTGGTTCATTCAAGGCGACACCAACATCTCGTACCTTCAG 129285 Query 196286 GACAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTT 196345 || |||| || |||||| | | |||||| |||| | ||| |||| || ||||| Sbjct 129284 GAGCACGGAGTACGCATCTGGGATGCGTGGGCCGACGAGCACGGCGACCTCGGCCCGGTC 129225 Query 196346 TACGGTAAGCAGTGGCGT 196363 ||||| |||||||||||| Sbjct 129224 TACGGCAAGCAGTGGCGT 129207 >seq3574 Length=6226 Score = 116 bits (128), Expect = 6e-21 Identities = 174/243 (72%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182 ||||| |||||||| ||||| | ||| | | | | | |||||||||||||||||| | Sbjct 2695 GACCGCACCGGCACCGGCACGCGCAGCCTGTTTGGCCAC-CAGATGCGCTTCGATCTGAA 2753 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242 || || |||||| |||||||||||||||| | || ||| |||||| | ||||| Sbjct 2754 CGAAGGCTTCCCGGTGGTCACCACGAAGAAGGTGCACCTGAAAAGCATCATCCTGGAACT 2813 Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302 |||||||||||| ||| || ||||| | | ||| | || ||| || || Sbjct 2814 GCTGTGGTTCCTGCGCGGCGATTCCAACGCCCGCTGGCTGCAGGATCGCGGCGTGCGCAT 2873 Query 196303 CTGGAACGAGTGGGC---GAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTG 196359 ||||||||| ||||| | ||| || ||||||||||||| ||||| |||||| Sbjct 2874 CTGGAACGAATGGGCCGGGCCCGA---TGGCGACCTGGGGCCGGTGTACGGCGTGCAGTG 2930 Query 196360 GCG 196362 ||| Sbjct 2931 GCG 2933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771455254285920