Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq6036 699 0.0 >seq6036 Length=8020 Score = 699 bits (774), Expect = 0.0 Identities = 743/980 (76%), Gaps = 0/980 (0%) Strand=Plus/Plus Query 159794 TGGGAATCATTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 159853 |||||| ||||| | ||| | ||| ||| | ||||| | || |||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 159854 GGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATC 159913 || | ||| |||| || | || |||||||| || | |||| |||| |||||| Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 159914 GCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAC 159973 || ||||| || || || |||||||| |||||||| || || || |||||| | | ||| Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 159974 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTC 160033 ||||||||||||||||||||||||||| | || ||| ||||| || ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 160034 TATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAA 160093 || || ||||||||||| || || |||| |||||| | || ||||||||||||| |||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 160094 CTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTC 160153 | | || | |||||| | | || | | || ||||||||||| |||||| | Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTA 392 Query 160154 TCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCT 160213 ||||||||| | ||||||||||| ||||||| || || | |||||||||||| || || Sbjct 393 TCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCA 452 Query 160214 GCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCT 160273 |||||||| |||||| | || ||||| | ||||| ||||| ||||| |||| ||||||| Sbjct 453 GCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCT 512 Query 160274 CTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTT 160333 | ||||| ||||||||||| |||| ||| | ||||||||||| || ||||| || | Sbjct 513 TTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTA 572 Query 160334 ATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCT 160393 ||||| || ||||||||| ||||||||||| ||||| ||||| ||| | ||||| ||| Sbjct 573 ATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCT 632 Query 160394 ATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAG 160453 ||||| || || | || |||||| | | | | || || || |||| || || Sbjct 633 ATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACT 692 Query 160454 AACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGC 160513 ||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||| || || Sbjct 693 AACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGT 752 Query 160514 TACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTC 160573 |||||||||||||| ||||||||||| || || || |||||||| || || | |||||| Sbjct 753 TACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTC 812 Query 160574 TTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATG 160633 ||| | ||| ||||| ||| | || |||||||| ||||| | ||| || ||| ||| Sbjct 813 TTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATG 872 Query 160634 GCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTT 160693 || ||||| | || ||||||||||||||||| || | | || ||||| | || Sbjct 873 GCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTA 932 Query 160694 CTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAG 160753 | ||||||||||| || | ||||||| |||| | | || |||||||| |||||||| Sbjct 933 ATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAA 992 Query 160754 CGTAACGCTCACAACTTCCC 160773 |||||||| ||||||||||| Sbjct 993 CGTAACGCGCACAACTTCCC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551313722080800