Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq16896 201 2e-49 seq31557 132 8e-29 seq12889 132 8e-29 >seq16896 Length=15423 Score = 201 bits (222), Expect = 2e-49 Identities = 169/206 (82%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||| | |||||| || ||||||| || ||||| | ||||||||| | ||||| Sbjct 2840 GTCATTAGTAGAGCAAAACTTACTTGTCTCAGGATGGTCTTAGCCCAGCTCAAGCTCCCT 2899 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | ||||||||||||||||||||| || | | ||||| |||||||||||||||| Sbjct 2900 -TGAATGGGTGAACAATCCAACGCTTGGTGATCTTTTCTTCGCAATGATAGGAAGAGCCG 2958 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||| |||||||||||| || |||||||||||||||||| |||||||||||||||| Sbjct 2959 ACATGGAAGGATCAAAATCTGACTTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATT 3018 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 || || | ||||||||| || |||| Sbjct 3019 TCTATGTTGACTTTTCTGACAGCTCT 3044 >seq31557 Length=2339 Score = 132 bits (146), Expect = 8e-29 Identities = 107/128 (84%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 |||||| |||| |||||||| ||||| | |||||||||||| ||||||| || | ||| Sbjct 132 GACGGTTTAAATTCAGCTCACTCTCCCT-TGAGTGGGTGAACAGTCCAACGTTTGCTGAA 190 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 | |||||| ||| |||||||||||||||||||||| ||||||||| | ||||||||| Sbjct 191 TATTGCTTCACAATGGTAGGAAGAGCCGACATCGAAGGCTCAAAAAGCGAAGTCGCTATG 250 Query 182 AACGCTTG 189 |||| ||| Sbjct 251 AACGTTTG 258 Score = 98.7 bits (108), Expect = 2e-18 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 75 CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134 |||||||| |||||| | | | || ||| ||| | || || |||| |||||| | Sbjct 612 CAGCTCACCTTCCCT-TGAATAGGCGAAGAATACGACATTTGGTGAATATTGCTTCACAA 670 Query 135 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 || |||||||||||||||||||| | ||||||| ||| |||||| | |||||||| Sbjct 671 TGTTAGGAAGAGCCGACATCGAAAGCTCAAAAACCAATGTCGCTTTAGACGCTTGGTCAT 730 Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 ||||||| |||||| || | | | ||||||| || || Sbjct 731 TACAAGCCCGTTATCTCTATAGAGAATTTTCTGACATCT 769 Score = 80.6 bits (88), Expect = 5e-13 Identities = 105/143 (73%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| || | || | |||| ||||||| || | | | ||| ||| | || Sbjct 338 CTGTCTCAAGATGACCTTTATTCAGCGCACGTTCTCT-TGAACAAGCGAAGAATACGACA 396 Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 || |||| |||||| ||| |||||||||||||||||||||| ||||||||| | Sbjct 397 TTTGGTGAATATTGCTTCACAATGGTAGGAAGAGCCGACATCGAAGGCTCAAAAAGCGAG 456 Query 173 GTCGCTATGAACGCTTGG-CTGC 194 ||| | || ||||||||| |||| Sbjct 457 GTCACAATTAACGCTTGGTCTGC 479 Score = 77.0 bits (84), Expect = 6e-12 Identities = 99/134 (74%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 52 CCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||| ||| ||| | | |||||||||||| || | | | || ||| ||||||| Sbjct 1 CCTGTCTCAGGACAGTCATAGCTCAGCTCACGTTCTCT-TGAATTGGCGAATAATCCAAT 59 Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 || | |||| ||| ||||| ||| | |||||||| |||||||||||| ||| Sbjct 60 GCAGAGA-AATTTAATTTCTCAATGATGAGAAAAACCGACATCAAAGGATCAAAAATCAA 118 Query 172 CGTCGCTATGAACG 185 | |||||| |||| Sbjct 119 TGGCGCTATCAACG 132 >seq12889 Length=12358 Score = 132 bits (146), Expect = 8e-29 Identities = 107/128 (84%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 |||||| |||| |||||||| ||||| | |||||||||||| ||||||| || | ||| Sbjct 281 GACGGTTTAAATTCAGCTCACTCTCCCT-TGAGTGGGTGAACAGTCCAACGTTTGCTGAA 223 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 | |||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 222 TATTGCTTCACAATGGCAGGAAGAGCCGACATCGAAGGCTCAAAAAGCAAAGTCGCTATG 163 Query 182 AACGCTTG 189 |||| ||| Sbjct 162 AACGTTTG 155 Score = 125 bits (138), Expect = 1e-26 Identities = 135/176 (77%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG- 94 ||||||||| || ||| || ||||| ||||||||||| | |||||| |||| ||||| Sbjct 524 AGTAGGGTACAATTAAACTATCTCACGACGGTCTAAAACAAGCTCATGTTC---ATTAGA 468 Query 95 -TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 ||||||||| | ||||| || ||||||||||| ||| |||||| |||||| Sbjct 467 ATGGGTGAACGAGCCAACCTTTGGTAAATTCTGCTTCACTATCATAGGATTAGCCGAAGC 408 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG-CTGCCACAAGCCAGTTAT 208 | |||||||||||| ||| |||||| ||||| |||| ||| | || | |||| || Sbjct 407 CAAAGGATCAAAAAAGAACATCGCTAAGAACGTTTGGCCTGTCTCAGGACAGTCAT 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853875107904