Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq37138 369 3e-97 >seq37138 Length=11844 Score = 369 bits (408), Expect = 3e-97 Identities = 1025/1566 (65%), Gaps = 57/1566 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || ||||| || |||||||| || | || || | | ||| ||||| || || Sbjct 3565 ATCAACAGTAAACTGTATTGCATTAGCGGCTGGTTTTGTGCGCAAATAATACATTCCAGT 3624 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || ||||||| |||||| |||||||| || |||| ||| ||| |||| || || || Sbjct 3625 TTTAAGGCCAGATTTCCAAGCGTAGAAATGAATTGATGTTAACTTTCCATAGTTGGGTTC 3684 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || || || |||||||| ||||| || || || | ||| || ||||| Sbjct 3685 TGCAACGTGAATGTTAAAAGACTGACTTTGATCAATAAAAGCTCCTCTATCAGCTGCCAT 3744 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | ||| | | || || ||||| || |||||||| | | ||| | Sbjct 3745 TTTAATTGT-CGATTTAACTGAAATTTCCCAAACTGTCTTGTATAAGTCACGAATGGACT 3803 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 | ||||| || || | || | |||||||| | || ||||| |||| ||| Sbjct 3804 TAGGAATAGTTTCTATATTTTGTATAGAACCACGGCTTGATATAATTTGATTTTTCATGT 3863 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| || | | ||| | |||| | | | |||| |||| | ||||||| Sbjct 3864 TGTCATCCCATAATTCAAGTTCGGTTAGATCTCTGAGAAGGTGATGATTAACAACTTGGA 3923 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || || | ||||| | | || || || || || ||||||||||||||| Sbjct 3924 ATTCACCAGATAAAACACGCCTGGTGTATATATTAGAAGTATAAGGTTCAAAGGATTCAT 3983 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 | || || |||||||| || || ||||| || ||||||||||| || | || || |||| Sbjct 3984 TATTCCCAAGAATTTGAGCTGTTGATGCTGTAGGCATGGGAGCAACAAGTAAAGAATTTC 4043 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 | | || | | ||| ||| | | || | | ||| | ||||| |||| | | Sbjct 4044 GTATGCCATACTTTTGAATTCTCTCCTTTAAAGCATTCCAATCCCACAA--GTTTGTTGG 4101 Query 65616 CG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG-- 65671 || |||| | ||||| || | ||| | | || | || | || || Sbjct 4102 CGTAACATTC------CACATGTCGTATTGTAATATGCCTTTGCTTACAGGACTCCCTTC 4155 Query 65672 --AGGA-----AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAG 65724 | || || | || ||||| || || | || |||||| | ||| | Sbjct 4156 ATATGATTCATAAGGACCGAACACTTCC---------GCTAATTCACAGCTTGCCTCTAA 4206 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 ||| || | || || || || || || || ||| || | ||| | ||||| || Sbjct 4207 TGCTCCATAGTAGATTGTTTCAAATATTTGTATATTTAGCAAATATGCTTGCTCGCTTTC 4266 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 || || || |||||| | || | || || | ||| ||||||||||| || ||||| Sbjct 4267 ATATGGATAACGCATCAGTATAAGTGCATCTGCAAAACCCTGAACTCCAATTCCTATGGG 4326 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 ||||| | || ||| || | || ||||| | ||| || ||||| ||||| || || Sbjct 4327 TCGATGCCTCATATTAGATTTCTTGGCTTCAGGAAGAGGATAATAATTTATATCTATGAT 4386 Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAAT--TGTTCGAAATCAAAA 65962 ||||||||| ||| || | | | | ||| || | | || |||||| || Sbjct 4387 TTTATTCAAATTTTTTGTAAC-AGTTTTA-GTTACTTCTTTAAGCTTTTGAAAATCATAA 4444 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 ||| | | | | || ||| || ||| |||| |||||| || Sbjct 4445 GACTTATTAGCA---GAAATG------------AACATGTTAAGAGCAATAGATGCTAGA 4489 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| || |||||||| || || || | ||| ||||||||||| || |||| ||| ||| Sbjct 4490 TTGCAAACGGCTATCTCATCTGGCGCTGAATATTCGACAATTTCAGTACACAAATTGCTG 4549 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 || ||||| || | ||| | ||||||||| || | || || | |||||| |||| | Sbjct 4550 CATTTGATGGTACCAATATTTTTTTGATTACTTTTTCTGTTACAAGAATCCTTATACAAC 4609 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 || ||||| || || || || ||||||| |||||||| || |||||| | | || Sbjct 4610 ATATACGGTGTTCCTGTTTCTACTTGGGCTTCAATGATAGCAAACCAAAGTGACTGAGCT 4669 Query 66203 TTCACCGTAC----GTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258 || | | | | | || ||| | ||| || || | ||| || | | ||| || Sbjct 4670 TTAATTTTCCTATTGAAACGGCCTTCTTTT----TCATATTTTTCATATAACTCTTCAAA 4725 Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 ||| ||||| ||||| || | |||||| ||||| |||||||| || ||||| || Sbjct 4726 TTCTTCTCCCCAAACTTCATCAAGCCCTGGACATTTGTGGGGACACATAAGTGACCAGTC 4785 Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 ||||| |||||| || | ||| || |||||||| |||||||||||||| || | || Sbjct 4786 GCCATCAGATTCTACGCGTCTCATGAACAGATCAGGAATCCAGAGGGCGTAAAATAAGTC 4845 Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438 | ||||| || ||||| | || |||||| ||||| | ||||| || || || Sbjct 4846 TCTTGCTCTGTGTTCCTCTTTTCCTGTATTTTTTTTTAAGTCTAAAAACTCGAAAATATC 4905 Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498 | |||||| || || | ||| || || |||| || | ||| |||||||| ||||| Sbjct 4906 CGAATGCCAAGGCTCTAAGTATATAGCAAACGCACCAGGCCTTTTTCCGCCACCCTGGTC 4965 Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 || || || || ||||| ||||| || | ||||| || || | || |||||| |||| Sbjct 4966 TACATAACGTGCTACATTATTGAACACCCTTAACATAGGCACTAAGCCATTAGATGTGCC 5025 Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618 ||| |||||| || | | |||| || || ||| |||||||| | ||||| || Sbjct 5026 ATTAGTGCCGCATATTGATGTTCCTTTAGCTCGAATACAATGAACATTTATTCCAATTCC 5085 Query 66619 ACCGGC 66624 || || Sbjct 5086 TCCCGC 5091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397270330153760