Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_029617.1 Length=6380 Score E Sequences producing significant alignments: (Bits) Value seq61331 87.8 7e-14 >seq61331 Length=2812 Score = 87.8 bits (96), Expect = 7e-14 Identities = 116/156 (74%), Gaps = 10/156 (6%) Strand=Plus/Minus Query 1603 AAACTTAATAAATCCTTGCAGATGTGGGGTGCCAGAGTCGCCAACTTCTTTACCGAACAC 1662 |||| |||||| |||||||| ||||| || ||| |||||| |||||| |||||| ||| Sbjct 326 AAACACAATAAAACCTTGCAGGTGTGGTGTTCCACTGTCGCCTACTTCTCTACCGATCAC 267 Query 1663 GTGA-ACTTCAATTCCATCTTTACACCCTTTAAGACGTTCAACGTCTGCATCTGAGTAGT 1721 ||| |||| |||| | ||||| || ||| || ||| |||| | ||||| Sbjct 266 TTGATACTTGCATTCAAC---TACACG----AAACTTTTCTACATCTCCATCAGTGTAGT 214 Query 1722 TGTTAAACGTATAACACC-ATGCTTTGTACTGAGAC 1756 |||| || |||||||||| | |||||| | |||||| Sbjct 213 TGTTTAAGGTATAACACCAACGCTTTG-ATTGAGAC 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20286769457344