Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_032146.1 Length=1477 Score E Sequences producing significant alignments: (Bits) Value seq61322 197 1e-47 >seq61322 Length=2737 Score = 197 bits (218), Expect = 1e-47 Identities = 447/667 (67%), Gaps = 24/667 (4%) Strand=Plus/Plus Query 193 ACCAACTGACCTTTTATATCAAG-AAGCAAAACGTCGAACATTGCGTGCTTTTATGTTAG 251 ||||| ||||||| | || |||| || | ||| | |||||||||||||| |||| | | Sbjct 1566 ACCAAGTGACCTTCTCTA-CAAGCAACCTAAAAGACGAACATTGCGTGCATTTAAACTTG 1624 Query 252 ATAAGCCTGTACCAATGATTCACCTAAATGATGTCTTTCAGGAGGATCTTCCAATCTGGA 311 || || || |||| | | |||||||||| |||| || | | ||||| |||| Sbjct 1625 ATGCTCCAGTTAAAATGCTGTATTTAAATGATGTATTTCGACAGAACTTGCCAATTTGGA 1684 Query 312 GTTCATCACCTGGGCTTCCATGGATGCAATGCGGATATAGAACAAAGAATGACATTCGTC 371 |||||| || || | || ||| || | ||||||| |||||| || | ||| Sbjct 1685 GTTCATATCCAGGATTACCTTGGTCACAGTTAGGATATAAAACAAAAGCTGCTAGCCGTG 1744 Query 372 GCGACCCCGACGCGATCAACCGCATTAGGCACTTCTGGCATAGAATTAAATGTTTCGAAG 431 ||||| || ||| | || || | || || |||||| |||| || ||| | Sbjct 1745 ATGACCCTGATGCGGTAAAACGTGTAAGATGGTTTTGGCATTGAATAAAGTGTCATCAGA 1804 Query 432 AAGTACATCTACCGGACTGTTGTGCATATGTGCGTACACATATTGTTGAGCGTGGCGAGA 491 || | | || || || ||||| || ||||| | ||| ||||| ||| Sbjct 1805 AAATTGAACTTCCTGATTGTTGGGCTTATGTTCATACCCATATCGTT------------- 1851 Query 492 CAAAAGTCCGTGCAGTGTGGGGTTATCCGGCAACGGTGACCTTTGGCGAAGCAGTATTTG 551 |||||| ||| || | ||| | | | || || || || || |||||||| ||||||| Sbjct 1852 -AAAAGTG-GTG--GTTTAGGGATTTTCCGCTACTGTCACGTTCGGCGAAGCCGTATTTG 1907 Query 552 CACTCCCCCTGATTCAAGCGTATAAGAAGGGAGGATATCCTATTGCATATGGATTTGAGA 611 || | || || || | || | ||| |||| | |||| ||||||||||||||||||| Sbjct 1908 CATTACCACTTATACGTGCTTCCAAGTAGGGCGATTATCGCATTGCATATGGATTTGAGA 1967 Query 612 CCGGCAACGCTGGTTGTAAGAAGATGT--TCCATGGTATGAAGGGCAACCACTACCTTGG 669 | || || || || || ||||| || | | || | || | || ||| || ||||| Sbjct 1968 CTGGAAATGCAGGATGCAAGAAAATATATTACACATTTCGAGGCGC--CCATTATCTTGG 2025 Query 670 AATTGATTTCACCAGTTTTGATAAGACCCTTCCACCATGGCTGGTCTCCACGGCCTTTGA 729 |||||| || | || |||||||| || ||| || | |||||| | || ||||| Sbjct 2026 AATTGACTTTAAAAGCTTTGATAAAACACTTTCAGCTTGGCTGAGTGAGATAGCTTTTGA 2085 Query 730 CATACTGGCCTATAACATTGATTTTCTACACTATCGAGATCACGGAATTGCTCGTGTCAA 789 ||||| || ||||| | ||||| || || || | |||| | || | || | | | | Sbjct 2086 TATACTTGCATATAATAACGATTTCCTGCATTACCAAGATAATGGTACAGCACATCTAGA 2145 Query 790 ATCAATGGTCCATATGTTTAACGTTATTAAGGATTACGCCATTAACACGAAAATACGCAT 849 ||| | ||||||||| | | || || ||| |||| | || || || |||||||| || Sbjct 2146 ATCCACTCTCCATATGTATGAAGTAATAAAGAATTATGTAATAAATACCAAAATACGAAT 2205 Query 850 GTGTAAT 856 || |||| Sbjct 2206 GT-TAAT 2211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4614585925092