Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_032897.1 Length=2073 Score E Sequences producing significant alignments: (Bits) Value seq33187 188 9e-45 >seq33187 Length=9873 Score = 188 bits (208), Expect = 9e-45 Identities = 275/385 (71%), Gaps = 23/385 (6%) Strand=Plus/Minus Query 878 AGGTTCAAGTGTCGCGTACAGCCTTGGAGCTATGACGAGTACATTGAGTCGATGGATTGC 937 ||||||||| | |||| |||||||| ||||| ||||| || || || ||||| || Sbjct 6927 AGGTTCAAGCGGAAGTTACATCCTTGGAGTTATGAAGAGTATATCGACTCTATGGACAGC 6868 Query 938 CCCAGCAAGCGCCAGTTCTACTTG--GATACCAAGTTGGATATGGAAGCCGGAAGAACCA 995 ||||||| || || || | ||| || ||| || | |||| | Sbjct 6867 TCCAGCAAACGAGGATTTTAAGAGCGGATTTATAGACAAATACAAAATAA--ACGAACTA 6810 Query 996 TCTCTAATAGAATCACTCCATTCACAAAGCTCGAAAAGATGGGAACAAATAAGTACAAAG 1055 || | | | |||||||| ||||||||||||||||| || ||| |||| |||||||||| Sbjct 6809 TCCCGAGTGACATCACTCCTTTCACAAAGCTCGAAAAAATTGGACCAAACAAGTACAAAG 6750 Query 1056 CTCCACGACTTATTCAAGCTCGCCACCCCACCTTTAACTTGGCTCTTGGATGTTACATCA 1115 ||||||| ||| ||||| |||||||||||| |||| |||| || | Sbjct 6749 CTCCACG---------------CCATCCCACATTTAACTTGGCTTATGGACGTTAAATTA 6705 Query 1116 AACCACTTGAACGCGCTCTCAAGTTCCGCGATA-ATTTCGGCAAAGGAACTTATGACCAA 1174 ||||||| ||| ||||||| || | ||| | ||||||||| ||||||||||| | Sbjct 6704 AACCACTAGAAACGTCTCTCAAATTGGAC-ATACACTTCGGCAAATGAACTTATGACGAC 6646 Query 1175 ATTGGCGCCAAAGTGGCAC-GCCTCAGTAGAAAGTATAAATACTACACTGAGGGAGACCA 1233 ||||| |||||||| ||| | || || | || ||||||||||||||||||||||| Sbjct 6645 ATTGGAGCCAAAGT-TCACAGACTTGCTAAACGTTACAAATACTACACTGAGGGAGACCA 6587 Query 1234 TCTTACCTTCGATGCACACGTCACT 1258 | |||||| ||||| ||||||||| Sbjct 6586 TAGTACCTTTGATGCTCACGTCACT 6562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6520541026516