Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_033082.1 Length=6206 Score E Sequences producing significant alignments: (Bits) Value seq20354 95.1 5e-16 >seq20354 Length=9926 Score = 95.1 bits (104), Expect = 5e-16 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 2904 GATAGGAATGACTTGTGTGCAAATATCTTTAATCTTGAATCAAAATTTTTTAAATATAAT 2963 ||||||||| || ||||| ||| | |||||| | || |||||||||||| ||||| Sbjct 880 GATAGGAATTACGAATGTGCGAATTTGTTTAATTTAGAGTCAAAATTTTTTTT-TATAAA 938 Query 2964 TATTCATATTTTTGTTCTAAATATTTATTGATTGTTAATGGTAAATTCAGATTCATACCA 3023 |||| ||||||||||| || | |||||||| | || |||| || | | | |||||| Sbjct 939 AATTCTTATTTTTGTTCAAAGTTTTTATTGAATATTGATGGGTTCTTTAAACTTATACCA 998 Query 3024 -GATCCATTGAAAGTACTCACTAAATTTGGTAGACACGATATAGTTAATTGGGAACATTT 3082 ||||| || ||| || | | ||| | ||| | ||| | || |||| || || | Sbjct 999 GGATCCTTTAAAAATATTAATAAAACTGGGTCGTAGTGATTTGGTAAATTATGATCACGT 1058 Query 3083 AGAAGAATATCGCATATCAATGACAGATTTATTA 3116 ||||| ||| | |||||| ||||||||| Sbjct 1059 CGAAGACTATAGGGTATCAACATATGATTTATTA 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19730354279920