Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_033269.1 Length=8318 Score E Sequences producing significant alignments: (Bits) Value seq20354 174 8e-40 >seq20354 Length=9926 Score = 174 bits (192), Expect = 8e-40 Identities = 186/243 (77%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 4333 GATAGAAATCATGAATGCGCTAATTTATTTAATTTAGAATCAAAATTTTTCAATTATAAG 4392 ||||| ||| | ||||| || ||||| ||||||||||| ||||||||||| |||||| Sbjct 880 GATAGGAATTACGAATGTGCGAATTTGTTTAATTTAGAGTCAAAATTTTTTT-TTATAAA 938 Query 4393 TATTCATATTTTTGTTCTAAATTTATATTAAATATAGACGGATATTTTAAAATTATACCT 4452 |||| ||||||||||| || ||| |||| ||||| || || | |||||| ||||||| Sbjct 939 AATTCTTATTTTTGTTCAAAGTTTTTATTGAATATTGATGGGTTCTTTAAACTTATACCA 998 Query 4453 G-ACCCTTTAAAAATATTAATTAAGTTTGGTAGATCAGATTTAGTAAATTATCAACATTT 4511 | | ||||||||||||||||| || | ||| | ||||| ||||||||| | || | Sbjct 999 GGATCCTTTAAAAATATTAATAAAACTGGGTCGTAGTGATTTGGTAAATTATGATCACGT 1058 Query 4512 GGAAGATTACAGGATCTCTACTAAAGATTTATTAATATTATATAATGATGCAAATATTGA 4571 ||||| || ||| | || || | ||||||||| |||||||||| | |||||||| Sbjct 1059 CGAAGACTATAGGGTATCAACATATGATTTATTACGTATATATAATGACACTAATATTGA 1118 Query 4572 CGA 4574 || Sbjct 1119 TGA 1121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26484083330032