Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_033749.1 Length=2221 Score E Sequences producing significant alignments: (Bits) Value seq33187 150 3e-33 >seq33187 Length=9873 Score = 150 bits (166), Expect = 3e-33 Identities = 185/255 (73%), Gaps = 21/255 (8%) Strand=Plus/Minus Query 1059 ATCACTCCTTTCACTAAGCTGGAGAAAATGTCAACATCTAAATACAAAGCTCCAAGACTT 1118 |||||||||||||| ||||| || ||||| | || || |||||||||||| | | | Sbjct 6798 ATCACTCCTTTCACAAAGCTCGAAAAAATTGGACCAAACAAGTACAAAGCTCCACGCCAT 6739 Query 1119 ATACAAGGAAGGCACCCCACATTTAACTTATGCTATGGACGCTATATCAAACCACTGGAA 1178 |||||||||||||| |||||||| || || |||||||| ||| Sbjct 6738 ---------------CCCACATTTAACTTGGCTTATGGACGTTAAATTAAACCACTAGAA 6694 Query 1179 CGCAGTCTCAAAGGCGACCGACACTTTGGCAAAGGAACTTACGACGATATTGGCCGCAAA 1238 ||||||| ||| |||||| |||||| ||||||| ||||| ||||| |||| Sbjct 6693 ACGTCTCTCAAATTGGACATACACTTCGGCAAATGAACTTATGACGACATTGGAGCCAAA 6634 Query 1239 ATACACAAGCTCTCTCGCAAA---TATAAATACTACACTGAGGGAGACCATACTACCTTT 1295 | |||| || || ||| || ||||||||||||||||||||||||| ||||||| Sbjct 6633 GTTCACAGACTTGCT---AAACGTTACAAATACTACACTGAGGGAGACCATAGTACCTTT 6577 Query 1296 GACTCTCACGTCACT 1310 || ||||||||||| Sbjct 6576 GATGCTCACGTCACT 6562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6993831890628