Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq15720 401 9e-110 seq135172 141 1e-31 seq55582 111 2e-22 >seq15720 Length=4117 Score = 401 bits (444), Expect = 9e-110 Identities = 245/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 662 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 719 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 CTCGTTTAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTT 779 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 780 CCCAGGCCTGTCGGCCAAGGTTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 839 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 899 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 900 GCCATAGTCCCTCTAA 915 >seq135172 Length=1984 Score = 141 bits (156), Expect = 1e-31 Identities = 170/219 (78%), Gaps = 13/219 (6%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 |||||||||| |||| ||||| || ||||||||| |||||| |||||| || ||| | | Sbjct 1 CAGGGACGTAATCAATGCGAG-TTAATGACTCGCACTTACTGGGAATT-CCAGGTTCATG 58 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGATT-ACCCGGAC 127 |||| || || | | ||||| | || || || | |||| | || |||||||| Sbjct 59 TG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGTTTACCCGGAC 115 Query 128 CTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCAGA 186 || |||| | ||| ||| || ||||| ||| | || |||||||||||||| |||||| Sbjct 116 CTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGTGCAGCCCAGG 172 Query 187 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||||||||||||| ||||| || Sbjct 173 ACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 210 >seq55582 Length=1790 Score = 111 bits (122), Expect = 2e-22 Identities = 93/109 (85%), Gaps = 5/109 (5%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 |||||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 329 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 273 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 272 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750934962140