Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq145976 136 1e-27 >seq145976 Length=1681 Score = 136 bits (150), Expect = 1e-27 Identities = 199/280 (71%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719 |||||| | ||| | ||||| ||||||| ||||||||| || ||||| | | || || Sbjct 664 CCATTTGCGAGTTTGTAACTGCCCTTCAATATAAACTTGAGAACCTTTTTTTAAGTATTC 723 Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779 |||||||||||| || | || ||||| | || | || |||||||| ||| | || Sbjct 724 ACCAGCAATTTCTGCTAATTTACCAAAAACGACAATTCGATGCCATTCGGTTCGGTCGCG 783 Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839 | ||| || ||||| ||||||||||| || ||||| | | || ||||| Sbjct 784 CATTTCATTTGTTTGTTTATCCTTCCATGATTCAGAGGTAGCGATGCTAAAATTTGCAAC 843 Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899 |||| |||||||| | || || ||||| || || |||||||| | || | | || Sbjct 844 CGCGCTTCCATTTGGTAGATAACGAACTTCAGGATCTTGGCCTAAGTTTCCAACTAAAAT 903 Query 33900 TACTTTATTTACGCCGCGAGTTGCCATTTATTAAAATCCT 33939 |||||||||| || |||||||||| ||| |||| |||| Sbjct 904 AACTTTATTTATTCCTCGAGTTGCCA-TTAATAAACTCCT 942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144721115983808