Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq98366 163 1e-37 seq57800 136 2e-29 seq44626 136 2e-29 seq23848 136 2e-29 seq1584 136 2e-29 >seq98366 Length=202 Score = 163 bits (180), Expect = 1e-37 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 29 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 88 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| ||| |||||||||||||| ||||||| | || |||||||||||| |||| Sbjct 89 TAAATATGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 148 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 149 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 193 >seq57800 Length=10586 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 7108 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 7167 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 7168 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 7227 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 7228 ATAGGGGCGA 7237 Score = 131 bits (144), Expect = 7e-28 Identities = 117/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 6302 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 6361 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 6362 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 6420 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 6421 GAGAGAGTTCAAGAGTACGTGAAA 6444 >seq44626 Length=951 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 281 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 222 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 221 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 162 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 161 ATAGGGGCGA 152 >seq23848 Length=22051 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 2293 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 2352 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 2353 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 2412 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 2413 ATAGGGGCGA 2422 Score = 131 bits (144), Expect = 7e-28 Identities = 117/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 1487 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 1546 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 1547 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 1605 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 1606 GAGAGAGTTCAAGAGTACGTGAAA 1629 >seq1584 Length=39437 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 17728 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 17669 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 17668 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 17609 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 17608 ATAGGGGCGA 17599 Score = 118 bits (130), Expect = 4e-24 Identities = 114/144 (79%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 25790 GAGTCGCGTTGCTTGAGATTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAATGCTAAAT 25731 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 25730 AC-GACCACGAGACCGATAGCCAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 25672 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 || ||||| || || | |||||| Sbjct 25671 GAGGGAGTTCAAGAGTATGTGAAA 25648 Score = 111 bits (122), Expect = 7e-22 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||||||||||||||| |||| ||||| || || || ||| ||||| ||| Sbjct 24973 GTTGGGACCCGAAAGATGGTGTACTAGGCCTGGTCTGGATGGAGTCAGGAGAAACCCTGA 24914 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || |||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 24913 CGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTATAGGGGCGA 24855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075975744050