Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq88980 396 5e-108 seq47936 334 1e-89 seq23848 334 1e-89 seq1584 334 1e-89 seq931 80.6 5e-13 >seq88980 Length=402 Score = 396 bits (438), Expect = 5e-108 Identities = 245/262 (94%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 60 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | |||||||||||||||||| ||| |||||||||||| |||||||||||||||||| Sbjct 61 TGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGAC 120 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 180 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||| |||||||||| ||||||| ||| || ||||||||||||||||| Sbjct 181 TGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGC 240 Query 272 CACACTTTCATGGTTTGTATTC 293 ||| |||||| |||| |||||| Sbjct 241 CACGCTTTCACGGTTCGTATTC 262 >seq47936 Length=10355 Score = 334 bits (370), Expect = 1e-89 Identities = 246/283 (87%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 9374 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 9433 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 9434 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 9493 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 9494 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 9553 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 9554 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 9613 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 9614 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 9654 >seq23848 Length=22051 Score = 334 bits (370), Expect = 1e-89 Identities = 246/283 (87%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 12512 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 12453 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 12452 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 12393 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 12392 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 12333 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 12332 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 12273 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 12272 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 12232 >seq1584 Length=39437 Score = 334 bits (370), Expect = 1e-89 Identities = 246/283 (87%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 15253 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 15312 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 15313 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 15372 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 15373 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 15432 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 15433 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 15492 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 15493 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 15533 >seq931 Length=518342 Score = 80.6 bits (88), Expect = 5e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 ||||| |||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct 174679 CTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGATGTTGCTATGAA 174735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852797051616