Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3247 282 1e-73 seq24318 205 3e-50 seq131801 196 1e-47 seq1073 111 5e-22 >seq3247 Length=73488 Score = 282 bits (312), Expect = 1e-73 Identities = 397/550 (72%), Gaps = 57/550 (10%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || ||| |||| ||||| | || | | | | || ||||| ||| | | ||||||||| Sbjct 62250 GTGCTCTTTCCGATTACGGGGCCTCGGATGTGTCCCGTATCGTTATCTTTCGTCACTACC 62309 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct 62310 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGTCTGCTACCTTCCTTCGATGTTGTAGCCGT 62369 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 62370 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 62429 Query 180 AGGC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG- 237 || | || | ||||||||||| |||||||| |||||| |||||| | | ||| || Sbjct 62430 AGACGCAGGA-CCTACCATCGACAGTTGATAAGGCAGATATTTGAGAAATGCGTCGACGG 62488 Query 238 -GCT-CAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGC-CCCGAAGG 292 ||| | | |||| | || | | |||| || |||||| |||| ||| || Sbjct 62489 TGCTAGACGACCATACTATCAGCACACATATATTCAGAGTCACCA--GAGCAAACGATGG 62546 Query 293 GCG-----------------------TTGGTTTTTTATCTAATAAA----TACACCCCTT 325 || |||| |||| ||||||| || | | | || | Sbjct 62547 ACGAACAGCAAGCCATCCGCCACCGATTGG-TTTTGATCTAATTAAAGCGTTCCCACCAT 62605 Query 326 -------CCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCA 378 | ||| || || || |||||||||||| || ||||||||| |||||||| Sbjct 62606 ATCTGGACGGAACTCTGG----TTTGCATGTATTAGCCCTGGAATTACCAGAGTTATCCA 62661 Query 379 TGT--AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436 || | | |||| ||| || ||| ||||| ||||||||||| ||||||| |||||| Sbjct 62662 AGTAAATTTGGGTAAGATCTAAGGAACCATAACCGATTTAATGAGACATTCGCGGTTTCA 62721 Query 437 CTGTATAGATT--GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 | | |||| | | |||| |||| |||||||||||||||||| ||||||| ||||| Sbjct 62722 C---CTTGATTCGGTATGTACTGAGACGTGCATGGCTTAATCTTTGGGACAAGCGTATGA 62778 Query 495 CTACTGGCAG 504 ||||||| || Sbjct 62779 CTACTGGAAG 62788 >seq24318 Length=3129 Score = 205 bits (226), Expect = 3e-50 Identities = 262/356 (74%), Gaps = 49/356 (14%) Strand=Plus/Plus Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGG---C 246 ||||||||||| |||||||| |||||| ||||||| || | ||||||| | || | Sbjct 1 CCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGTGCTAGATGAC 60 Query 247 CATGCGATTCG--TTAAGTTATTATGAATCACCAAGGAGCCC-CGAAGGGCG-------- 295 |||||||| | | |||||||| || ||||||| ||| ||| || || Sbjct 61 CATGCGATCGGCATAAAGTTATTCAGAGTCACCAA--AGCAAACGATGGACGGACAGCGA 118 Query 296 ---------------TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGT-- 338 |||||||| |||||||||| || ||| || | || | | Sbjct 119 GCCATCCGCCACCGATTGGTTTTG-ATCTAATAAAAGCATTCCTCCC-ATCTCTGAGAGG 176 Query 339 ---TT--TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTA 390 || || |||||||||||||||||||||||||| |||||||| ||| || |||| Sbjct 177 AACTTCGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTG-GGTA 235 Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--G 448 | ||| || |||| ||||||||||||||||||||||||| |||||||| || ||| | Sbjct 236 CGATCTAAGAAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACTTTA---ATTCAG 292 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | | |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 293 CCTGTACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 348 >seq131801 Length=220 Score = 196 bits (216), Expect = 1e-47 Identities = 124/133 (93%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || |||||| |||| |||||||||||||||||| Sbjct 89 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 147 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 148 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 207 Query 121 TCTCAGGCTCCCT 133 ||||||||||||| Sbjct 208 TCTCAGGCTCCCT 220 >seq1073 Length=1777474 Score = 111 bits (122), Expect = 5e-22 Identities = 115/148 (78%), Gaps = 7/148 (5%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT--AGTAAGGTACTATCAAA 398 || ||||| |||||||||||||||||||| | |||||| || | ||||| ||| || Sbjct 624701 TTTGCATGCATTAGCTCTAGAATTACCACAGCTATCCAAGTGAACGTGGGTACGATCTAA 624760 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACT 456 |||| |||| ||||||| ||||||||||| ||||||| || ||| || | ||| Sbjct 624761 GAAACCATAATCGATTTAACGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGTACC 624817 Query 457 TAGACATGCATGGCTTAATCTTTGAGAC 484 || ||||||||| ||||||||||| || Sbjct 624818 GAGGCATGCATGGTTTAATCTTTGAAAC 624845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507566323456