Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq1023 123 2e-23 >seq1023 Length=1865667 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 ||||||| ||||| ||||||||||||||||||| |||| | || || ||||||||||| Sbjct 1591967 GATGATGCAAGAATGTGTAAAATTTGTTATAATGGAGAATTAGGAGTGGTATTTTTACCA 1591908 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| ||||| || || ||| | |||||||| || ||||||| |||| |||| || Sbjct 1591907 TGTGGACATATGGTTGCTTGTGTAAAATGTGCTCCTGGAATGACATCTTGTGCAGTATGC 1591848 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | |||| || | |||| ||||| | ||||| ||||| Sbjct 1591847 AGAGAACCTGTTACAATGACCGTACGAGCCTTCTTCTCATA 1591807 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 26029 ACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAACAACTTTCAAATGCGGGt 26088 ||||||| ||||||||||||| | ||| | || || |||||| | || |||| || Sbjct 1592506 ACATTTGTAACATGGCCAAAATCTATGCCACAAACAAAGGAACAATTAGCAGATGCAGGC 1592447 Query 26089 tttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAATGTGGTGGTTCTATAAAT 26148 |||| |||| | |||| ||| ||| || ||||||||||| ||||| ||| |||| Sbjct 1592446 TTTTATTATACTGGAACTGGTGATCAAACTTTATGTTATCATTGTGGAGGTGGCTTAAAG 1592387 Query 26149 AATTTTGAATTACATGACGATCCATGGATACGACATGCAAAAGAATATCCAAATTGTTTA 26208 ||| ||| | || ||||| ||| | ||||||||| | | | || || | Sbjct 1592386 GATTGGGAACCTGAAGATGATCCTTGGGAGCAACATGCAAAGTGGTTTTCTAAGTGCTAT 1592327 Query 26209 TATGTATTTCTTGTTAAAGGACAAGATTATATAAATA 26245 || |||| | ||| |||||||||||||| |||||| Sbjct 1592326 TACCTATTAATGGTTCAAGGACAAGATTATGTAAATA 1592290 Score = 98.7 bits (108), Expect = 7e-16 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 25598 TTGCAAAAGCTGGATTGTATTATATTGGTGAAAATGATAGTGTTAAATGTTTTGAATGTA 25657 ||||| |||||||| ||||| | |||||| ||||| || | ||||||||||||| Sbjct 1592892 TTGCAGCTGCTGGATTTTATTACACAGGTGAAGGTGATAAAGTAAGATGTTTTGAATGTC 1592833 Query 25658 ACGTTACTATTATG-AAATGGGAAGAAGATGATGAACCTTTAGCATGTCATAAAAGATGG 25716 | || | |||| |||||| |||| |||| ||| | | |||| || | ||| Sbjct 1592832 AAGTGGAGA-TATGTCAATGGGTGGAAGGTGATATTCCTATGGTTGATCATCAACGTTGG 1592774 Query 25717 TCTGCAAGATGTCGATTTATTAGAAAAATTGCTTGTGGAAATGTTCCAATAGGTATTGAT 25776 | ||||| ||| |||||||| | ||||| |||||| ||||| ||||| || | ||| Sbjct 1592773 GCAGCAAGGTGTAGATTTATTCGTAAAATGAATTGTGGTAATGTACCAATTGGAGTAGAT 1592714 Query 25777 CCAAATACAGT 25787 || |||||||| Sbjct 1592713 CCCAATACAGT 1592703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355709602813794