Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq335 237 3e-60 >seq335 Length=2521975 Score = 237 bits (262), Expect = 3e-60 Identities = 154/169 (91%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 52 CCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| || Sbjct 1198874 CCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCTGAC 1198815 Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 || | |||||||||||| ||||||||||||||||||||| |||||||||||||| | Sbjct 1198814 ACTATCAGAATTCTGCTTCTCAATGATAGGAAGAGCCGACATCTAAGGATCAAAAAGCTA 1198755 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1198754 CGTCGCTATGAACGCTTGGCAGCCACAAGCCAGTTATCCCTGTGGTAAC 1198706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854341054944